Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0627 ATGGATGAAGCTCAGGTTGGCTCTGGTTCCTTGCCTCCTTTCTTGGCGAAAACATATGAGATGGTGGAGGATCCTACCTCGGATTCGGTAGTTTCTTGGAGTAGCACTAATAAAAGTTTTGTAGTATGGGATCCGACAGAATTTGCAAGGGATTTGCTACCGAGATTCTTTAAGCATAGTAACTTCTCGAGTTTCATCAGGCAGTTGAACACTTATGGTTTTAGAAAAATTGATCCAGAACGGTGGGAATTTGCTAATGATGATTTTATAAGGGGTCAACCACATCTTTTGAAGAGTATCCATAGGCGAAAACCAGTTCATAGCCATTCTTCACAGAATCAGCAGGGACATGGAGATTCTCCATTATCTGAATCAGAAAGGCAGAATTTCAGAGATGAAATAAGGAGGCTTAAACAAGATAAAGAAGTACTTGCTTTAGATTTACAGAGATATGAACAGGAATGGCAAACTTGTGAGATAAAAATACATTGCTCAAGCAACCGGTTGGAGAAGTTGGAAAAGAAGCAACAAAAGACGGTCTCTTCACTTTCTCAAGCCTTGCAGAAACATGGGTTTGCTTTAAATCTTTGTTCACCTTCAGAATCGCCGGATAGAAAACGAAGGTTGCCGAGAGGCGGGTCCTTTTGTGATGAAGCTAGCATTGAAGATCCTATGGAGACTTCCCAAATGTCACCTAGAGAAATCTCTATACTGACATCATCCATGGAGCGATTGACTCAGCTGGAATCATCTCTATTATTCTGGGAGAACATTGCACATGATGTCGGGGATACATATGTTCAAAGTTCTTCAAACTTGGACTTTGATGAGTCTACAAGTTGTCCTGATAGTCCATCGATATCGTGTGTGCAACTAGATATCGAAATTCAGCCACCAAAGTCATCTGGAATCGACATGAATGCTGAACCTGCTGCATCTTCCGTTCCTGAGACTGTTACGTCAAAAGAACAAGCAGTGGAAACAATAACTGTGGCGACTGGTGTTAATGATGTCTTCTGGGAACAGTTCTTGACAGAGAATCCCGGTTCATCAGAGACACATGAGGTGCAGATGGAAATGAAGGATTCTGATGCCAGAAAGAATGAAGGAAAACCTACTGAAGGAAATAGATTTTGGTGGAATATGCGGAATGTAAATAATCTTCCAGAACAGATTGGGCATCTTAGTCAAGCAGAGAAAACTTAG 1206 0.4129 MDEAQVGSGSLPPFLAKTYEMVEDPTSDSVVSWSSTNKSFVVWDPTEFARDLLPRFFKHSNFSSFIRQLNTYGFRKIDPERWEFANDDFIRGQPHLLKSIHRRKPVHSHSSQNQQGHGDSPLSESERQNFRDEIRRLKQDKEVLALDLQRYEQEWQTCEIKIHCSSNRLEKLEKKQQKTVSSLSQALQKHGFALNLCSPSESPDRKRRLPRGGSFCDEASIEDPMETSQMSPREISILTSSMERLTQLESSLLFWENIAHDVGDTYVQSSSNLDFDESTSCPDSPSISCVQLDIEIQPPKSSGIDMNAEPAASSVPETVTSKEQAVETITVATGVNDVFWEQFLTENPGSSETHEVQMEMKDSDARKNEGKPTEGNRFWWNMRNVNNLPEQIGHLSQAEKT 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0627 401 MobiDBLite consensus disorder prediction 348 378 - -
Lele33g0627 401 MobiDBLite consensus disorder prediction 109 123 - -
Lele33g0627 401 FunFam Heat shock transcription factor 1 7 104 - -
Lele33g0627 401 MobiDBLite consensus disorder prediction 101 128 - -
Lele33g0627 401 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele33g0627 401 MobiDBLite consensus disorder prediction 197 219 - -
Lele33g0627 401 SUPERFAMILY "Winged helix" DNA-binding domain 10 103 IPR036390 -
Lele33g0627 401 Coils Coil 169 189 - -
Lele33g0627 401 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele33g0627 401 Gene3D - 8 104 IPR036388 -
Lele33g0627 401 MobiDBLite consensus disorder prediction 355 373 - -
Lele33g0627 401 Coils Coil 127 154 - -
Lele33g0627 401 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele33g0627 401 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele33g0627 401 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele33g0627 401 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 232 IPR027725 -
Lele33g0627 401 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0627 Lele-ChrLele33 4650140 4651458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0627 1 401 HSF AT4G18880 50.847 8.77e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele33g0627 HSF_DNA-bind 3.5e-32 CL0123