Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0622 ATGGCTTCGTTGTCTTCAACTAATGCAACCCATGAGGTTGTTCTGAACCTCAATGGCAAATCCAATTATAAAGATTCCTGCATCTCCGACGTCATCGTCCCTTTCTTGCAGAAGTTGGTGGCGGAATTTGTCGGGACTTTTTTCCTGATGTTTGCAGGGCAAGCATCAGAGGTGGTGAACGAGGGCTACGACAACCAACTAGCCCTTCCTGGGATTGCCGTAGTTTGGGGTCTTGCCGTTTTGATTCTTGTCTACGCCGTCAGTCACATCTCCGGTGCCCATTTCAATCCCGCCGTCACTCTCGCTTTTGCTTCTATCGGACGGTTCCCCCTCATACAGGTTCCAGCTTATATATCAGTGCAGGTTATGGCATCGATACTTGCGAGTGGGACTCTGAGGCTTATATTCACAGGAAGGCATGACCACTTCGCAGGAACACTATTATCTGGGACTCATTTTCAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACATCATGCTTGTTAAGTATTCTACCAGTGGTCTCGCCACTGATAACAAGGCTATTACGCAGGTGGCTGGTCTGGCAGTAGGGTGTACCATGTTGCTGAATGTGATGTTTGCCGGGCCGGTGACCGGAGCATCGATGAACCCGGCAAGAAGCTTAGGGCCAGCGATTGTGTGGCACAGATACACTGGATTATGGGTGTACATGACAGCGCCGGTGGCCGGAGCAGTGGCGGGGGCATGGGTGTATAACATCATGATTTATACAAAAAAACCGATAAGAGATATCACAAAGACTGCTTCTTTCAACCAAGTTTCAAGCATTTGTGATGATTCAATCATTTCTGAATCATCCCAGGCAAAATTAATTCGTTAG 864 0.478 MASLSSTNATHEVVLNLNGKSNYKDSCISDVIVPFLQKLVAEFVGTFFLMFAGQASEVVNEGYDNQLALPGIAVVWGLAVLILVYAVSHISGAHFNPAVTLAFASIGRFPLIQVPAYISVQVMASILASGTLRLIFTGRHDHFAGTLLSGTHFQGFVVEFIITFYIMLVKYSTSGLATDNKAITQVAGLAVGCTMLLNVMFAGPVTGASMNPARSLGPAIVWHRYTGLWVYMTAPVAGAVAGAWVYNIMIYTKKPIRDITKTASFNQVSSICDDSIISESSQAKLIR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0622 287 Pfam Major intrinsic protein 33 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 Gene3D Glycerol uptake facilitator protein. 6 261 IPR023271 -
Lele33g0622 287 TIGRFAM MIP: MIP family channel proteins 41 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 SUPERFAMILY Aquaporin-like 32 256 IPR023271 -
Lele33g0622 287 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Lele33g0622 287 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele33g0622 287 PANTHER AQUAPORIN NIP2-1 22 265 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0622 Lele-ChrLele33 4612315 4615721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0622 20 279 Major Intrinsic Protein MIP AT5G37820 49.627 3.64e-84 253