Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0618 ATGCTGGCAAGGAACTTCTTCGCTTTCCTAATTATTGCGTTGAGTTCTTTCAGATGGCTCAGATATGCAGAATCTAAACTTTCCCTAGAAGAAGTTGATTCTCTTGAAGAAATTATTAGAACAATGGGTAGCACCTACTGGAAGTTTGATGGCGACTCTTGTCAAATTGAAATGGTGGGGTTGACACAAGTGCCACCCAGTGGATCACAGAGCAGCATTGGTTGTCAATGTTTTTCTGAAAATGGCACTAACTGTCATGTTGTGAGCATTTCGCTCAAGGGGTACAACCTTCCTGGTGTGCTTCCATCTCAACTGGTCAAGCTTCCTTACCTTAAAGAAGTTGATTTTGGTCTCAATTACCTAAATGGTACAATCCCTAAGGAATGGACTTCAATGAATTTATCTTCAATCTCTCTTCTTGTGAATCATTTGTCAGGCGAAATTCCTAAGGAGCTGGGAAAGATGACCTCTCTAACCTACCTGAGCCTTGAATCAAACCAATTTTCTGGTCTTGTTCCCCCTGAGCTTGGAAATCTGATTAACCTGCAGTCTTTGATGCTGTCATCCAATAAATTTTCAGGACATTTGCCAGTAACATTTGCTCAATTAAAGAATTTGACAGATTTTAGGATAAATGATAACAATTTCAGAGGAACAATGCCTAATTTCATCCAGAATTGGAAACTACTTCAAAGACTAGAAATGCATGGAAGTGGACTTGAAGGACCCATCCCATCAAACATGTCTCTTCTAAATAATTTACAGCAACTGAGAATTAGTAACATAGGTGGTCCAAGTCAGGATTTTCCTTCCCTACGCAATATGACAGCACTGATAAGATTGGTTTTAAGAAATTGCAAAATTACTGGAGAGCTGCCTGCCTACATCTGGACGATGCAGGATTTGGAAATGCTGGATGTCAGTTTTAATAAGTTAGTTGGGGAAATTCCAACAACTGTTAGTGCAAAGCATCTGAAATTTGTCTTTTTGACTGGCAACATGCTAAGTGGAAATATACCAGACTCAATCTTGAAGGCTGGAAGCAACATTGATCTTTCTTACAACAATTTTACACTAAGTCCTGAGCAACATGCCTGTCGGGATAACCTGAATTTAAACCTAAATCTGTTTCAGAGCTCCTCAGGGCCCAATGATATAAGGGGAACTTTGCCATGCACGAAGAATTTCAGTTGTCCAAGATATTCAACTTGTTTGCATGTTAATAGTGGTGGAAAGGATGTAACTGTGATAGAAAATAAAAAACATTTGCTCTACATAGGAGATGGAGATGTGTTAGGCGGTACAGCAAAATTTTATTATGATTCCAACAATCATTGGGGATTCAGCAGCACTGGGGACTTCATGGATGACAATGACTTCCTCAATACACGTTACACTGTCTTTCTGGAATCTTCAAATTTGCCTGATATATATGCAACGGCTCGTATCTCCCCGATTTCACTAACTTATTTTCACTATTGCTTGGAAAATGGGAACTATACTGTAAATGTACACTTTGCAGAGATACAATTTACGAATGATAAGACGTATAATAGTCTTGGGAAGCGTATATTTGATATCTATGTTCAGGGAAGACTGGTTCGGAAGGATTTCAATATTGAAGATGAAGCGCATGCTGCTCGAAAGCCAATTAAAATACCAATATATAATGTTAATGTGACAGATAATGTCTTGGATATTCAATTCTATTGGGCTGGCAAAGGGACCACAAGAATTCCTAACAGTGGAGTTTATGGTCCCCTCGTATCAGCTTTATCTATTGTTTCTGAGTCTAAACGTTGCTCAGATGGCGTAAAAAGGGGAAGTGCTAATATAATAATTGGAGTTGCAGTTGGAGTTGGGGCTTTCTGCCTAATACTATTTATAGCGGGACTCTTTTGGTGGAGAAGCCATTTCAGAAGAAAACCTAGGAGGGAAAAAGGTGCCGAAGGACTAGATTCCCATATAGGAACATATAGCCTAAAACAGATAAGAGATGCCACTGATGACTTCAGTTCTGATAACAAGTTAGGGGAAGGTGGTTTTGGTCCTGTCTATAAGGGCCAGTTATCTGATGGTACTTTGGTGGCAGTCAAACAACTTTCTTCAAAGTCCCGACAAGGAAACCGTGAATTTTTAAATGAGATAGGCATGATATCCTGTTTGCAACACCCTAATCTTGTAAAGCTTCACGGATGTTGTATTGAAGGGGATCAACTATTGTTGGTTTATGAGTACTTGGAAAATAATAACCTTGCCCGTGCTTTGTTCAGCCGAAGAAATCAGATTAAACTTGATTGGCCTACAAGGCTTAAAATCTGTATTGGCATAGCGAAGGGTCTTGCATTTCTTCATGAAGAATCAGTACTCAAGATTGTTCACCGAGACATCAAGGCCACTAACGTGTTATTGGACGGGAATTTAAATCCTAAGATATCTGACTTTGGATTGGCTAGGCTCAATGAAGAGGAGAAGACCCATATTAGTACCCGAGTGGCCGGGACTATAGGATATATGGCTCCAGAATATGCATTGTGGGGTTACCTTACTTACAAGGCAGATGTTTATAGTTTCGGGGTTGTGGTCTTGGAAATTATTAGTGGGAGAAGCAACAATGATTATATGCCAAGTGATAATTGCGTTTGTCTTTTGGATTGGGCGTGCTATTTGCATAAAACTGAGAACATGATGCAACTGGTTGATGAAAGGTTGGGATCTGAGGTGAACCCAAAAGAAGTTGAAGTCGTGGCGAAAGTGGCTCTTCTGTGCACTAATGCGTCGCCGTCGCTTAGACCAACTATGTCTGAAGTTGTGAACATGCTCGAAGGAAGAATGAGCATTCCCAAGGTTAACCCAGAGCAAAGTGCTGGTGAAGATCTGAGGTTTAGAGCCTTAAGGGACATTCAAAAGCATAGAGAAAGTCAGAGTGTGAGCACAAGCCAAACAGAAAATCCAACTGATCCCATTGTAAATAGCTCTCCCATAACATCTGAACATGATCTACATGGGATACGCTCAGAACCATAA 3027 0.4017 MLARNFFAFLIIALSSFRWLRYAESKLSLEEVDSLEEIIRTMGSTYWKFDGDSCQIEMVGLTQVPPSGSQSSIGCQCFSENGTNCHVVSISLKGYNLPGVLPSQLVKLPYLKEVDFGLNYLNGTIPKEWTSMNLSSISLLVNHLSGEIPKELGKMTSLTYLSLESNQFSGLVPPELGNLINLQSLMLSSNKFSGHLPVTFAQLKNLTDFRINDNNFRGTMPNFIQNWKLLQRLEMHGSGLEGPIPSNMSLLNNLQQLRISNIGGPSQDFPSLRNMTALIRLVLRNCKITGELPAYIWTMQDLEMLDVSFNKLVGEIPTTVSAKHLKFVFLTGNMLSGNIPDSILKAGSNIDLSYNNFTLSPEQHACRDNLNLNLNLFQSSSGPNDIRGTLPCTKNFSCPRYSTCLHVNSGGKDVTVIENKKHLLYIGDGDVLGGTAKFYYDSNNHWGFSSTGDFMDDNDFLNTRYTVFLESSNLPDIYATARISPISLTYFHYCLENGNYTVNVHFAEIQFTNDKTYNSLGKRIFDIYVQGRLVRKDFNIEDEAHAARKPIKIPIYNVNVTDNVLDIQFYWAGKGTTRIPNSGVYGPLVSALSIVSESKRCSDGVKRGSANIIIGVAVGVGAFCLILFIAGLFWWRSHFRRKPRREKGAEGLDSHIGTYSLKQIRDATDDFSSDNKLGEGGFGPVYKGQLSDGTLVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLLLVYEYLENNNLARALFSRRNQIKLDWPTRLKICIGIAKGLAFLHEESVLKIVHRDIKATNVLLDGNLNPKISDFGLARLNEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIISGRSNNDYMPSDNCVCLLDWACYLHKTENMMQLVDERLGSEVNPKEVEVVAKVALLCTNASPSLRPTMSEVVNMLEGRMSIPKVNPEQSAGEDLRFRALRDIQKHRESQSVSTSQTENPTDPIVNSSPITSEHDLHGIRSEP 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0618 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 977 - -
Lele33g0618 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 597 - -
Lele33g0618 1008 SMART serkin_6 671 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0618 1008 SUPERFAMILY L domain-like 81 342 - -
Lele33g0618 1008 SUPERFAMILY Protein kinase-like (PK-like) 654 947 IPR011009 -
Lele33g0618 1008 SUPERFAMILY Galactose-binding domain-like 435 575 IPR008979 -
Lele33g0618 1008 ProSiteProfiles Protein kinase domain profile. 671 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0618 1008 Gene3D - 401 599 - -
Lele33g0618 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Lele33g0618 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 747 953 - -
Lele33g0618 1008 Pfam Protein tyrosine and serine/threonine kinase 674 941 IPR001245 GO:0004672|GO:0006468
Lele33g0618 1008 Gene3D Ribonuclease Inhibitor 47 197 IPR032675 -
Lele33g0618 1008 Gene3D Ribonuclease Inhibitor 198 262 IPR032675 -
Lele33g0618 1008 Gene3D Ribonuclease Inhibitor 263 371 IPR032675 -
Lele33g0618 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 385 - -
Lele33g0618 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Lele33g0618 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 746 - -
Lele33g0618 1008 MobiDBLite consensus disorder prediction 974 999 - -
Lele33g0618 1008 Pfam Malectin domain 404 592 IPR021720 -
Lele33g0618 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Lele33g0618 1008 Gene3D Transferase(Phosphotransferase) domain 1 747 958 - -
Lele33g0618 1008 CDD STKc_IRAK 677 943 - -
Lele33g0618 1008 Gene3D Phosphorylase Kinase; domain 1 636 746 - -
Lele33g0618 1008 MobiDBLite consensus disorder prediction 968 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0618 Lele-ChrLele33 4566228 4575160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0618 5 836 Receptor kinase-like Gene Family AT1G29750 60.215 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0618 PK_Tyr_Ser-Thr 4.8e-51 CL0016