Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0587 ATGCCTCGTAAGGTGAATTATGGACTTGATTATGGTGATGATTACGATGACTATGATGTTGAAATAGAAGAATATGGAGAAGAACCTGAACCTGTTAAAAAGCAAGAGACTAGAGGGATTTGGAGATGCTCTATTTGCACTTACGACAACGAAGAGGGGATGAATGTATGTGATATTTGTGGTGTTGTGCGTCATCCCTTGGTTAACACAGGAGCTTCTAACAATAACAAAACAGCTCCTTTCAAGTTTGATGTTCCATCCCCGGATGATGTGGTTTCTACTGGACTGCGGTCTTCCAAAATGGGATTGAAAGGCACAATTGCAGACACTAGAAGTTTAAATAATGAACTGAAAGTAAAGTCAAATGGTGAAAGTTCAGATGGCTCATCATCTTTAGTTCAGAAGGGTAGGCAGGATATTTTTGCTGAGAGCAAGCATTCTAAGGATGTAGCATTTAATCAGGAAATAAGTGGTAAGACTTCAAGTAGCTTACCAGCATCTTCTGCGAAGGGTGAAGCTAAAATGAGTAAAATCAAGTCTTCCAATGATGGAAAATTTGATATTCAATCCAATGAAGAATTATCGAATAGTTTGTCTGCACTGCTGAAAGTCAGAGACAGTGGTGGTGAAATTCATTGCTCTTCTATCAAAGATGTCGGATCTCAAAGTAGTTCTGAGAACATGGCTCTTGATGTAAGAACAGGAAAATCAGATAATACTATTTCCAAAGGACCACATCCGCAAATGCCTTATAAACCAGAAAAATGGATGCTCCCTCAACAAGCTGAAGATACCTTGACTCAGCTGAATCTTGCAGTTGTTGGTCATGTCGATTCTGGGAAGTCAACACTCTCAGGTAGACTACTACACCTATCAGGACGCATTACACAGAAAGAAATGCACAAATATGAAAAGGAAGCCAAATTGCAGGGTAAGGGATCCTTTGCTTATGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTTGCTGTTGCATATTTTGACACAAAGAAATATCATGTTGTTGTGCTCGACTCCCCAGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACGCAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTTGGTGCGTATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAGCTTATTAGGAGTTTTGGTGTTGACCATGTTATTGTTGCAATAAATAAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGATTTAATTAGACAGCAATTGGGAGTGTTTCTCCGGTCATGTGGTTTTAAAGATTCTTCTGTGTCATGGATTCCCATGAGTGTCGTAGAAAATCAAAATTTGGTGGCATCTCCTTCTGACGCTCGTTTCAAATCCTGGTATAAAGGACCGTATCTGTTAGATGCAATTGATTCGCTGCAACCTCCAACTAGAGAATTCTCAAAGCCTCTACTAATGCCAATATGTGACGTTATCAAGTCACCAACACTTGGACAGATCTCTGCTTGTGGTAAATTAGAAGCTGGAGCTCTTCGGATTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTAGAGCGGGATTCTAATGCCTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTCACGTTGAATGGTGTGGATGTAAGTCATGTAATGCCAGGAGGAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAAGGTGCAAATCCCATATTGGTAGGATCGCAGTTAGAGTTTCATATACACCACGCCAAGGAGCCTGCTAAAGTTTCAAAAATATTGTCAATACTTGATCCGAAGACTGGGAAGGTGACAAAAAAGTCCCCTCGCTGTCTCATTGCAAAGCAGAGTGCAGTAGTTGAGGTAATGTTGCAAGAGCCAGTATGTGTGGTAGAATCATCTAGTTGTAAAGCTCTTGGAAGGGTGTCTTTAAGAGCGTTAGGAAGAACAATCGCTGTTGGACTTGTGACCCGAATAATGGGAGAGCAAGAGTGA 2094 0.4121 MPRKVNYGLDYGDDYDDYDVEIEEYGEEPEPVKKQETRGIWRCSICTYDNEEGMNVCDICGVVRHPLVNTGASNNNKTAPFKFDVPSPDDVVSTGLRSSKMGLKGTIADTRSLNNELKVKSNGESSDGSSSLVQKGRQDIFAESKHSKDVAFNQEISGKTSSSLPASSAKGEAKMSKIKSSNDGKFDIQSNEELSNSLSALLKVRDSGGEIHCSSIKDVGSQSSSENMALDVRTGKSDNTISKGPHPQMPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLSGRITQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDHVIVAINKMDAVGYSKDRFDLIRQQLGVFLRSCGFKDSSVSWIPMSVVENQNLVASPSDARFKSWYKGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSPTLGQISACGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSNACTIARAGDNVAVTLNGVDVSHVMPGGVLCHPDFPVKVASHLELKVLVLEGANPILVGSQLEFHIHHAKEPAKVSKILSILDPKTGKVTKKSPRCLIAKQSAVVEVMLQEPVCVVESSSCKALGRVSLRALGRTIAVGLVTRIMGEQE 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0587 697 MobiDBLite consensus disorder prediction 152 185 - -
Lele33g0587 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 511 IPR027417 -
Lele33g0587 697 Pfam Elongation factor Tu C-terminal domain 584 692 IPR004160 -
Lele33g0587 697 SMART zf_4 39 63 IPR001876 -
Lele33g0587 697 FunFam Translation elongation factor EF-1 493 583 - -
Lele33g0587 697 Gene3D - 257 490 IPR027417 -
Lele33g0587 697 CDD EF1_alpha 270 489 - -
Lele33g0587 697 PRINTS GTP-binding elongation factor signature 410 419 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 PRINTS GTP-binding elongation factor signature 270 283 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 PRINTS GTP-binding elongation factor signature 329 337 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 PRINTS GTP-binding elongation factor signature 365 376 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 PRINTS GTP-binding elongation factor signature 349 359 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 CDD HBS1_C_III 584 692 - -
Lele33g0587 697 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 590 692 IPR009001 -
Lele33g0587 697 SUPERFAMILY Translation proteins 488 583 IPR009000 -
Lele33g0587 697 SUPERFAMILY Ran binding protein zinc finger-like 38 64 IPR036443 -
Lele33g0587 697 ProSitePatterns Zinc finger RanBP2-type signature. 41 60 IPR001876 -
Lele33g0587 697 Gene3D Translation factors 494 583 - -
Lele33g0587 697 MobiDBLite consensus disorder prediction 153 169 - -
Lele33g0587 697 FunFam Elongation factor 1 alpha-like protein 259 490 - -
Lele33g0587 697 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 266 497 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 FunFam elongation factor 1-alpha isoform X4 587 696 - -
Lele33g0587 697 PANTHER TRANSLATION FACTOR 265 692 - -
Lele33g0587 697 MobiDBLite consensus disorder prediction 114 135 - -
Lele33g0587 697 Pfam Elongation factor Tu GTP binding domain 269 485 IPR000795 GO:0003924|GO:0005525
Lele33g0587 697 Gene3D Translation factors 587 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0587 Lele-ChrLele33 4212742 4219522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0587 36 693 Eukaryotic Initiation Factors Gene Family AT5G10630 61.053 0.0 805