Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0580 ATGCTAGGTGGGGAAGCAAACCCTAGTTCGCAATCCAGGGTCAAGAAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTTAAGGAAAACTGGCGCAGGCCGAAGGGTATTGATTCACGTGTCAGGAGGAAGTTCAAAGGATGCACGTTGATGCCAAACATTGGTTATGGTTCAGACAAGAAGACTCGTCACTATCTCCCAAATGGTTTCAAGAAATTTGTTGTGAACAACGTTAAAGAATTGGAACTACTCATGATGCACAACAGGACTTATTGTGCTGAGATTGCTCACAATGTGTCCACAAGGAAGAGAAAGGAAATAGTTGAGAGAGCTGCCCAACTTGATGTTGTTGTGACCAACAGAACAGCTAGACTCCGCAGCCAGGAGGATGAATAG 399 0.4586 MLGGEANPSSQSRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRTARLRSQEDE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0580 132 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 11 132 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele33g0580 132 SMART Ribosomal_L32e_2 14 121 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele33g0580 132 SUPERFAMILY Ribosomal protein L32e 12 130 IPR036351 -
Lele33g0580 132 MobiDBLite consensus disorder prediction 1 27 - -
Lele33g0580 132 Pfam Ribosomal protein L32 15 121 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele33g0580 132 CDD Ribosomal_L32_L32e 15 121 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele33g0580 132 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0580 Lele-ChrLele33 4154463 4157688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0580 13 132 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 87.500 1.67e-77 223