Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0568 ATGGATTCAGAAGATTTTCAAGCTATTCTCCGAAGTTTTGAAGAGGCTCTGTTCATTCAAAATGACGACGTGGTGCCGAAGACTGAAACAAATCATCTGGTCGATCAAGTTCCATCCACGAGCTCAAACACTTGGCCTTCCAACTACAATTCAGAGTATCATATGTCATTGAACTCAAATCTACCCAATAATATCTCATGCACTATTCCAGCTATGGATCATCAAAACCAGCTGATTCCTCATTCTAATGTTCCAATGCATCATCAGAGTGAAGGGGTGACAGAAACACCAATTGAAGAAGTTAATTGTGCTCATCATGAATACTGTTATCATCAAACTAATCCTATGGATCATCACAACCAGATTCCTCATTCAGACGTTCCAATACATCATCAGAGTGAAGCGGTGATGGAGGCACCGGTTCAAGTAGTTAGTCATGCTCAGGAATGCTTCTATCATCAAACTGACACTATAGATCAGAACCAGATTCCTAATTCAACTAATCAACACCATACTATTCCTTCAAGATCAATTCTTCCAAAGCCTTCAATACATCAATTTGACACACACAGTCTTTCAAATGGTCCAATGAATCAGCCACAACCATTAAATAATGATCAATTTAACTTCCAAATTCCTTATGATTTTCCAGTACATAGGTCACCTCCAATAGATGAATTCAACCCACAAGTTCCTTCAGCTATTCCACTGCAAATGCAACTTTCTATGAATCAATTTAACCTACAAAATATCACACAATTGACCCCAAACATGTCGTCAGGATTGGTCAACCAGCAACCACATCACATGTCACCGAGGATGACAATGTTCCCTAAGTTTCCATCATCAGGCCCTTGTCATGCTACTCATTCAACTCCTCAAAACCACATTGTTCATCAAGTTCCTCCCATACATCAATGGAATAGACAAAATCCATCTAATGTTATTCAATATAACCCACATCCACTGACCTCACCAGAGTTTTCATCAGACCCTTGGCTCTCTGATAGGCAGCACTTGGGGAATCAGCTTTCCTTTAACTCGGAAGCACCAATAAATATTGATCAAACCGATACCAAGGGAAAGTTATGGAGCAAAGAAGAACACAAGAAATTTCTGATGGGATTGCGAATATATGGGAAGGGAAAATGGAAGAAAATTTCCCAACATATGAAGACGAGGACATCAATTCAGATTGGTAGCCATGCTCAGAAATTCTTTGAGCGCCAAAATAGGGAAGGAAATAAAAAAAGAAAAAGAAAAAGCATCAATGATATCACCGATCCTGATGCTTTTCCCTGA 1302 0.3925 MDSEDFQAILRSFEEALFIQNDDVVPKTETNHLVDQVPSTSSNTWPSNYNSEYHMSLNSNLPNNISCTIPAMDHQNQLIPHSNVPMHHQSEGVTETPIEEVNCAHHEYCYHQTNPMDHHNQIPHSDVPIHHQSEAVMEAPVQVVSHAQECFYHQTDTIDQNQIPNSTNQHHTIPSRSILPKPSIHQFDTHSLSNGPMNQPQPLNNDQFNFQIPYDFPVHRSPPIDEFNPQVPSAIPLQMQLSMNQFNLQNITQLTPNMSSGLVNQQPHHMSPRMTMFPKFPSSGPCHATHSTPQNHIVHQVPPIHQWNRQNPSNVIQYNPHPLTSPEFSSDPWLSDRQHLGNQLSFNSEAPINIDQTDTKGKLWSKEEHKKFLMGLRIYGKGKWKKISQHMKTRTSIQIGSHAQKFFERQNREGNKKRKRKSINDITDPDAFP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0568 433 SMART sant 360 409 IPR001005 -
Lele33g0568 433 Pfam Myb-like DNA-binding domain 364 405 IPR001005 -
Lele33g0568 433 MobiDBLite consensus disorder prediction 160 176 - -
Lele33g0568 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 358 411 IPR017930 -
Lele33g0568 433 SUPERFAMILY Homeodomain-like 360 412 IPR009057 -
Lele33g0568 433 Gene3D - 364 412 - -
Lele33g0568 433 ProSiteProfiles Myb-like domain profile. 356 407 IPR001005 -
Lele33g0568 433 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 299 428 IPR043363 -
Lele33g0568 433 MobiDBLite consensus disorder prediction 160 181 - -
Lele33g0568 433 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 363 410 IPR006447 GO:0003677
Lele33g0568 433 CDD SANT 364 407 IPR001005 -
Lele33g0568 433 MobiDBLite consensus disorder prediction 406 426 - -
Lele33g0568 433 MobiDBLite consensus disorder prediction 400 433 - -
Lele33g0568 433 ProSiteProfiles SANT domain profile. 364 411 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0568 Lele-ChrLele33 3993608 3995023 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele33g0568 Myb_DNA-binding 4e-11 CL0123