Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0559 ATGGAAAACGAGCCTCTTCTCACATATTACAGTCCCAGAAAGCGTCATACACCTTTGCATCTGGCGCCTCTGACAGAGAATGACGAGGTGGTCCTTCCTCTAAGCCCATCGGAGATTAAGGACCGTCTTATCTTTGGCCCCTCGACTCCTAGAGATTCTGCAGCTTTAGTTGAAGCACTCACGCTCTCGCTTAATTCCCCAGGACAACCTTCTTCTTCACACGATCTTTTAGCTACTGTCGTACAATCACAATCCAAATTACCCCAAAAACCATGCTCCAACCCTTCTGTTCGTCGCTGTCAAACGGCACCGGCTATGTCTGTGATCAAAGAATTCAACCAACGCTCTGAGCCTAAACCTCAATGTAGTTCAAATTCAATTGTTTGCCAAGCGGCTATTCTGCTTGTTATTTATTTATCATTGGGGGTCGTTATATACTTTCTCAATCGTCATAGTTTTACCGGAATCGAGACTAATCCTGTCGTGGATGCGCTCTATTATTGTGTCGTGACAATGTGCACAATAGGATACGGTGACATTACTCCCGCTAGTACAGCCACAAAGCTTTTTTCTATTCTGTTTGTATTGGTGGGATTTGGGTTCATCGACATATTGCTCGGTGGGATGGTGTGTCATGTTCTTGATTTACAAGAGAGTCACTTGTTGAAGACAATGAAGAGATCGTATGTAATTGATGCGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCCTTGGCGTTGTTGGTTGTGGTTCTTTGTATTGGGGTTGGTGTTTGTGTGATGCATTATGTGGAAAAACTTACATGGATGGATTCTTTCTATCTTTCTGTGATGTCAGTTACAACTGTTGGCTATGGTGACCAGGCTTTTAAGTCACTTTCTGGTCGCATCTTTGCTGCAATTTGGTTGCTTTTATCGACTCTTGCAGTTGCTAGGGCCTTTCTTTATTTAACTGAGGCAAGAGTGGATAAGAGGAATAGAAGAATGGCAAAGTGGATTCTTGGTCATGATATGAGTGTTTCTGAGTTTTTTGCTGCAGACTTAGACCATAATGGATGTGTGAGTAAATCAGAATTTGTTATATACAAGCTCAAGGAGATGGGCAAACTGTCTGAGAAAGACATCATGCTGGTTGGCGAGAAGTTTGATCAGCTAGATACTGGTGAACGTGGCTATATAAAGCTTGCTAACCTCAGGGAGGCTAATGATTGA 1215 0.4305 MENEPLLTYYSPRKRHTPLHLAPLTENDEVVLPLSPSEIKDRLIFGPSTPRDSAALVEALTLSLNSPGQPSSSHDLLATVVQSQSKLPQKPCSNPSVRRCQTAPAMSVIKEFNQRSEPKPQCSSNSIVCQAAILLVIYLSLGVVIYFLNRHSFTGIETNPVVDALYYCVVTMCTIGYGDITPASTATKLFSILFVLVGFGFIDILLGGMVCHVLDLQESHLLKTMKRSYVIDAKKGRMRIRMKVALALLVVVLCIGVGVCVMHYVEKLTWMDSFYLSVMSVTTVGYGDQAFKSLSGRIFAAIWLLLSTLAVARAFLYLTEARVDKRNRRMAKWILGHDMSVSEFFAADLDHNGCVSKSEFVIYKLKEMGKLSEKDIMLVGEKFDQLDTGERGYIKLANLREAND 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0559 404 ProSitePatterns EF-hand calcium-binding domain. 348 360 IPR018247 -
Lele33g0559 404 PRINTS Two pore domain K+ channel signature 282 291 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele33g0559 404 PRINTS Two pore domain K+ channel signature 170 198 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele33g0559 404 FunFam Two-pore potassium channel 3 227 341 - -
Lele33g0559 404 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 161 377 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele33g0559 404 SUPERFAMILY Voltage-gated potassium channels 125 210 - -
Lele33g0559 404 SUPERFAMILY Voltage-gated potassium channels 227 340 - -
Lele33g0559 404 SUPERFAMILY EF-hand 324 402 IPR011992 -
Lele33g0559 404 Gene3D - 125 224 - -
Lele33g0559 404 Pfam Ion channel 249 319 IPR013099 -
Lele33g0559 404 Pfam Ion channel 133 206 IPR013099 -
Lele33g0559 404 Gene3D - 225 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0559 Lele-ChrLele33 3834516 3836858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0559 3 403 Ion Channels AT4G18160 57.009 9.51e-161 457