Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0558 ATGTCTGATGAGCATAAGGAGCTATACGAGCAAGGCCGATCCACCATGTACTCGTCATCGTCTTATGATTCACAAGCTTTTGATCCTTCTTCTTACATGAGTTTATCTGAGTGTCTGCAAATAGAAGCCATGGACTACAATTCACTCGCATCTTCTTTTGGTCTCTCCGAGGTATTGATTTCATCTGCTGATCACCAACAAGAAGGCAACACTGATCAAAAGCCATCATCAGAAGATGCAGATTGCGGTGGCGCGGGAGCCGGCGGTGAAACTCCACTACTCAACCAGAACTCATCTCTCTCTTCCTCTTCTTCTGAACCTGGCCCTGAAGAAGAAGATTCAGGTAAGAACACTGTCGACGATCATCATAACCAAGCGAAACGAGAAGAAGAAGCAGAAAGATCCAGAAAAGGGAAGAAAGGAAAGAAGAAAGGAAATAAGAAGAAAGAGAAGGAGCCAAGGTTTGCTTTCATGACAAAGAGTGAGGTTGATCAGCTTGAAGATGGTTACCGATGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGTTACTACAGTTTCTAA 579 0.4387 MSDEHKELYEQGRSTMYSSSSYDSQAFDPSSYMSLSECLQIEAMDYNSLASSFGLSEVLISSADHQQEGNTDQKPSSEDADCGGAGAGGETPLLNQNSSLSSSSSEPGPEEEDSGKNTVDDHHNQAKREEEAERSRKGKKGKKKGNKKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYSF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0558 192 MobiDBLite consensus disorder prediction 1 29 - -
Lele33g0558 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 190 IPR044810 GO:0003700
Lele33g0558 192 MobiDBLite consensus disorder prediction 61 157 - -
Lele33g0558 192 SMART WRKY_cls 166 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g0558 192 MobiDBLite consensus disorder prediction 91 108 - -
Lele33g0558 192 MobiDBLite consensus disorder prediction 109 137 - -
Lele33g0558 192 Gene3D WRKY domain 153 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g0558 192 Pfam WRKY DNA -binding domain 167 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g0558 192 SUPERFAMILY WRKY DNA-binding domain 158 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g0558 192 MobiDBLite consensus disorder prediction 12 29 - -
Lele33g0558 192 ProSiteProfiles WRKY domain profile. 161 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0558 Lele-ChrLele33 3820849 3823495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0558 26 190 WRKY Transcription Factor Family AT4G18170 51.163 3.05e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele33g0558 WRKY 7.5e-10 CL0274