LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g0551	ATGGCGGCGTCTTTTAGGTGGATTTTACAACTTCACAAGGACGTTCCCAAAGCTGCTCGATTCTACGCGGAAGGCCTGGACTTCACCGTCAACGTCTGCACGCTTCGTTGGGCCGAACTTCACTACGGTTCCCTCAAGCTTGCCCTAATGCATTCTCCCAATGACCATGGCTTGCAGAGGGGATACTCCTCGCTTCTATCATTTACAGTTACTGACATCAACAGCACAGTGACTAAATTAATGTCATTAGGAGCTGAGCTAGATGGTCCTATAAAACATGAGATCCATGGAAAGGTTGCTGCTATAAGGTGTATTGATGGGCACGTTTTGGGCCTGTATGAACCACCCTTCCAACTTCTTCAACTCTTCCACCTTTCTCAATTATCATCCCACCTTCACATTTCTCTCAAGTTCTTAACCATGGCTGCCTCCACTATGGCTCTTTCTTCCCCATCTTTTGCCGGCAAGGCTGTTCCACTTGCTCCCGCTGCCACTGAGACCGGCCGTATCTCCATGAGGAAGACTGTCACCAAGCCTGTTTCCTCTGGAAGCCCATGGTATGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCTCCATCCTACTTGACTGGTGAATTCCCCGGTGACTACGGTTGGGACACCGCTGGGCTCTCTGCTGACCCAGAGACCTTTGCCAAGAATCGTGAGCTTGAAGTCATTCACTGTAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATTTTCAGCGAGGGTGGCCTTGACTACTTAGGTAACCCAAGCTTGATCCACGCACAGAGCATCCTTGCCATTTGGGCTTGCCAAGTGATCTTGATGGGAGCTGTGGAAGGCTACCGTATTGCTGGTGGGCCTCTCGGTGAGGTTACCGACCCACTCTACCCCGGTGGAAGCTTTGACCCATTGGGCTTGGCGGATGACCCAGAGGCCTTCGCCGAGTTGAAGGTGAAGGAGATCAAGAACGGTAGGTTGGCTATGTTCTCCATGTTTGGATTCTTTGTTCAGGCGATTGTGACCGGAAAGGGCCCATTGGAGAACCTTGCGGACCACCTTGCAGACCCAGTCAACAACAATGCTTGGGCATATGCCACGAACTTCGTCCCCGGAAAGTGA	1209	0.5252	MAASFRWILQLHKDVPKAARFYAEGLDFTVNVCTLRWAELHYGSLKLALMHSPNDHGLQRGYSSLLSFTVTDINSTVTKLMSLGAELDGPIKHEIHGKVAAIRCIDGHVLGLYEPPFQLLQLFHLSQLSSHLHISLKFLTMAASTMALSSPSFAGKAVPLAPAATETGRISMRKTVTKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g0551	402	FunFam	Chlorophyll a-b binding protein, chloroplastic	193	395	-	-
	Lele33g0551	402	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	3	115	IPR029068	-
	Lele33g0551	402	Pfam	Chlorophyll A-B binding protein	202	368	IPR022796	-
	Lele33g0551	402	Gene3D	-	11	117	IPR029068	-
	Lele33g0551	402	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	141	402	IPR001344	GO:0009765\|GO:0016020
	Lele33g0551	402	SUPERFAMILY	Chlorophyll a-b binding protein	185	399	-	-
	Lele33g0551	402	Gene3D	Chlorophyll a/b binding protein domain	193	395	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g0551	Lele-ChrLele33	3742037	3746512	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g0551	141	402	Chloroplast and Mitochondria Gene Families	AT1G29930	88.764	5.30e-172	479