Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0544 ATGGATGCAACCATTGCTTTAATGCTCATAGAAGCTGTCTTGATTTTGATAGCTATAGCAATTTCTAAAGCTATCAGATTAATCTCTCCGCTTGATGATAGTGGTAAAGATGCTGTTAGTTCGATTCCTGCAGTTTCTTCTCCTCCTTCTCACATCATTGAGTGGACAACTGCTTTGATCCAATCAACAAATCTCTCTGGGTGGGATTCAAACAATATCAGGTCCGAACCCAAACTTATTAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATAGCAAGTCGTCCTTTCATTTTGAAGGATTAGTTGGGATTAATCATCAGATTCAGAAAATTGAAGAGCTACTGAATGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATTGGTAAGACTACTCTTGCTAGAGCTGTATTTCACAAGTTGAAAGCACAGTTTGAAGCTTTCTCCTTTGTTGAAAATGTAAGAGAACAACTAGCAATAATTGGGTTTGACAGGTTACAGCAAGAATGTCTCAAAGAATTAATAAAAGATGAGGACATTAATGTCTTTGACATAAAATCCAATTTTGTGAGAATCATATCGGGCAACTTTGGAAAGGAGATCAACATTTTCCAAATTTAA 627 0.362 MDATIALMLIEAVLILIAIAISKAIRLISPLDDSGKDAVSSIPAVSSPPSHIIEWTTALIQSTNLSGWDSNNIRSEPKLIKKIVKDILSKLNSKSSFHFEGLVGINHQIQKIEELLNEARIVGIWGMGGIGKTTLARAVFHKLKAQFEAFSFVENVREQLAIIGFDRLQQECLKELIKDEDINVFDIKSNFVRIISGNFGKEINIFQI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0544 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 186 IPR027417 -
Lele33g0544 208 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 183 IPR044974 GO:0006952
Lele33g0544 208 Gene3D - 37 98 IPR035897 -
Lele33g0544 208 Pfam NB-ARC domain 112 181 IPR002182 GO:0043531
Lele33g0544 208 Gene3D - 99 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0544 Lele-ChrLele33 3706021 3708665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0544 54 193 WRKY Transcription Factor Family AT4G12020 32.192 5.56e-19 82.8