Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0542 ATGCTCGGAAAAGCTTTATTGATCCTATTGGGATCAGTATCAATTTCCAGAGCTATCAGATTCATCTCTCATTCGCTTAATCGTAACCAACCTGTTGCTGTTGATGATAGTTCTCAAGATGATCTTATTTTAACTCAAACGTTATCTCCTCCTGCTACCAAATTTAAAGACAACCAAGAACAATTGCAGAAGTGGAGAAATGCTTTAATCCAATCTACAAGTATCTCTGGATGGGATTCCACTACTATCAGAGCTGAATCCAAACTTATTGAAGAATTTGTCAAAGACATTTTGAGCAAGTTGAAGTATAAGTCATCATCTTATCTTGAAGAACTCTTTGGCATTGCTCCTCATATCGCAAGTATTGAAAAACTGCTAACTGAGGCTCGCATTGTGGGAATATGGGGTATGGGTGGTGCGGGTAAGACCACTCTTGCTAAAGCTTTATTTCATGAGTTGAAAACTCAATTTGATGCTTTCTCCTTTCTTGACAATGTCAAAGAGAAATTGAAAAGAATTAGTTTGGAGGAGTTACAGAAGAATTGCCTCAAAGAATTATTAAAAGATGAGGACATTGACATCACTGACATAAAATCTACTTTTGTTAAAAATAGGCTTGAAGGGAAAAAAATTCTTGTTATACTTGATGATGTGGACAACTCAATAATAGCTGAAGAATTAACCAAAGTGTGTGATTGGTTTGGGGAAGGAAGTAGAATTATAATCACATCAAGAGACATGCAAGTGCTTAAGAATGCTTCTGCATTTTCAACATATCATGTTCCGAGATTGGATTTTGATGATGCCTTTCATCTCTTTAGTTTAGAAGCATTCAAGCAAAATGAGCCAGATGAAGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCAAGGAAACCCATTAGCCCTAAAAGTGTTGGGCTGCTCTCTCTATGGCAGAGGAAAGCAAGAGTGGGAAAGTTCTTTGGAAAAACTAAACCAAGCTCCACCCAAGGACATTGTTGATGTTCTAAAATTGAGCTTTGATGGACTTGATGAGAATCAAAAGAATATGTTTCTTGACATAGCATTTTTCATCAAGGAAAGAGCTGAAGTTTCTTTGGACCTAATAAGCGGATTATATGGCTCTTCTGTAGATATTGACATAAGTGTTCTTAAAGATAGATCCCTCACTTCATTTGATCATAATGGCTATATTGAGATGCATGATCTTGTGAGGGACATGGGGGTTGAAATTGCTAGACAACAGTCATTCTCTAATCCTAATAACCCTGTTCGACTGCGAAGCCATTCTGAGTTATATTTGTTTGTCACCATGTTTCTCGATGGAGGTGATAACGTGGTCTACATGGTTTCGGGCTTCATATCCTTTTACTTTTTGTACCGATTTACTAGTGCATCAGATTCGTAG 1416 0.3701 MLGKALLILLGSVSISRAIRFISHSLNRNQPVAVDDSSQDDLILTQTLSPPATKFKDNQEQLQKWRNALIQSTSISGWDSTTIRAESKLIEEFVKDILSKLKYKSSSYLEELFGIAPHIASIEKLLTEARIVGIWGMGGAGKTTLAKALFHELKTQFDAFSFLDNVKEKLKRISLEELQKNCLKELLKDEDIDITDIKSTFVKNRLEGKKILVILDDVDNSIIAEELTKVCDWFGEGSRIIITSRDMQVLKNASAFSTYHVPRLDFDDAFHLFSLEAFKQNEPDEGYMELSKSVVKYCQGNPLALKVLGCSLYGRGKQEWESSLEKLNQAPPKDIVDVLKLSFDGLDENQKNMFLDIAFFIKERAEVSLDLISGLYGSSVDIDISVLKDRSLTSFDHNGYIEMHDLVRDMGVEIARQQSFSNPNNPVRLRSHSELYLFVTMFLDGGDNVVYMVSGFISFYFLYRFTSASDS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0542 471 FunFam Disease resistance protein (TIR-NBS-LRR class) 265 347 - -
Lele33g0542 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 357 IPR027417 -
Lele33g0542 471 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 434 IPR044974 GO:0006952
Lele33g0542 471 SUPERFAMILY "Winged helix" DNA-binding domain 334 419 IPR036390 -
Lele33g0542 471 PRINTS Disease resistance protein signature 298 312 - -
Lele33g0542 471 PRINTS Disease resistance protein signature 131 146 - -
Lele33g0542 471 PRINTS Disease resistance protein signature 205 219 - -
Lele33g0542 471 Pfam NB-ARC domain 123 331 IPR002182 GO:0043531
Lele33g0542 471 Gene3D - 106 258 IPR027417 -
Lele33g0542 471 Gene3D - 37 105 IPR035897 -
Lele33g0542 471 Gene3D - 264 347 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0542 Lele-ChrLele33 3674935 3677026 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0542 111 419 WRKY Transcription Factor Family AT5G45050 36.164 9.48e-51 184