Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0531 ATGGTTTCCCGAAATCAACCAAAAGAAGACATCCCTAAGAAGCAATGGTCCTTGAGAGACTTCGAGATCGGAAAACCGCTTGGAAAGGGGAAATTCGGTAGAGTCTACGTCGCTCGAGAAGTCAAGAGCAAATATATTGTGGCGCTTAAGGTTATCTTTAAGGAACAAATGGAAAAGTACAGAATTCATCATCAACTTAGGAGAGAGATGGAGATTCAGACCAGTCTTCAGCACCCCAACGTTCTGCGTCTCTATGGTTGGTTTCATGATGCTGAACGAATTTTCTTGATACTCGAGTATGCTCATAATGGTGAGCTTTACAAGGAGCTCAGAAAAAAAGGTTATCTCAATGAGAAGCAAGCAGCCACGTATATTTTGAGCCTCACAAAGGCGCTGGCATATTGTCATGAGAAGCATGTCATTCATAGGGATATAAAGCCCGAGAATTTGTTACTTGACCATGAGGGTCGCCTTAAGATTGCAGACTTTGGTTGGTCTGTACAGTCAAGAAGTAAGAGACATACCATGTGTGGAACATTGGATTATCTAGCACCAGAAATGATAGAAAACAAAGAACATGATTTTTCTGTTGATAACTGGACTCTGGGTATACTTTGTTATGAATTCCTCTATGGTTCTCCCCCATTTGAGGCTGAGAGTCAAGTTGACACATTCAAGAGGATAATGAAGATTGACCTAAATTTCCCTTCTACTCCTACTGTTTCTTCAGAAGCCAAAAATCTGATTAGCCGGCTCTTGGTGAAAGATTCCACAAGAAGGCTGTCACTTCAGAAGATTATGGAGCATCCTTGGATACTCAAGAATGCTGATCCTACGGGTGTCTGCAATAAATAG 855 0.4152 MVSRNQPKEDIPKKQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYIVALKVIFKEQMEKYRIHHQLRREMEIQTSLQHPNVLRLYGWFHDAERIFLILEYAHNGELYKELRKKGYLNEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMIENKEHDFSVDNWTLGILCYEFLYGSPPFEAESQVDTFKRIMKIDLNFPSTPTVSSEAKNLISRLLVKDSTRRLSLQKIMEHPWILKNADPTGVCNK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0531 284 Gene3D Phosphorylase Kinase; domain 1 10 104 - -
Lele33g0531 284 FunFam Serine/threonine-protein kinase ark1 13 283 - -
Lele33g0531 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lele33g0531 284 FunFam Aurora kinase A 13 104 - -
Lele33g0531 284 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0531 284 Gene3D Transferase(Phosphotransferase) domain 1 105 280 - -
Lele33g0531 284 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0531 284 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0531 284 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Lele33g0531 284 SUPERFAMILY Protein kinase-like (PK-like) 12 277 IPR011009 -
Lele33g0531 284 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 9 283 IPR030616 GO:0004672
Lele33g0531 284 CDD STKc_Aurora 20 273 - -
Lele33g0531 284 PIRSF ILK 2 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0531 Lele-ChrLele33 3514911 3517277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0531 21 278 CBL-interacting serine-threonine protein kinases AT5G10930 40.755 1.11e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lele33g0531 Pkinase 6.8e-76 CL0016