Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0527 ATGAGCGAGGAAGGCAAGAACAAGGGTGTCGTCACCAATTCCCCCAACCAGCCTTACTATGGCACCTTTCAAGGCGTCGCCAACTACTATCCGACTGCTCCACCCCCACCGCCGCAGCCTCACCCAGTGGTAGGATTTCCTCAGCCCATTCCGCCACCGGCAACGTACGGTGGTCATTATTACCAAGGATATCAAACCGTTCTAGGCTATGCTGTTGTTGAAGGAAGGCCCATCAGAGAGCATCGTCTTCCTTGTTGTGGACTTGGTCTGGGTTGGTTCTTGTTTATAACGGGATTCTTTCTTGGTGGCATTCCCTGGTATGCTGGAACCCTTGTTCTACTATGTGTACAGATGGATTACCGAGAAAAGCCTGGATTAGTTGCATGCACAGTTGCTTCAATTATTGCTGTGATAGCTGTGACTCTTGGTGTTACCAATAAAGCTCATGATTGAGAGGGACAGAGGCATCAGAGTCCTTCCTGTGTTCATCTTCTCTCGGAAATGGTTGCTTTCAGGTTCCACCAGTACCAGGTTGTTGGGAGGGCTCTGCCCACGGAAGCAGATGAGCACCCAAAGATTTACCGCATGAAACTCTGGGCTACGAACGAGGTTCGCGCCAAGTCGAAGTTCTGGTATTTTTTGAGGAAACTGAAGAAGGTTAAGAAAAGCAATGGTCAAGTGCTCGCCATAAATGAGATTTTTGAGAAGAACCCGACCAAGATCAAGAACTATGGCATCTGGTTGCGTTATCAGAGTAGGACTGGTTATCACAACATGTACAAAGAGTACCGTGATACCACTCTAAACGGAGCAGTCGAGGCGATGTACACCGAGATGGCTTCCCGTCACAGGGTCCGGTTCCCTTGCATTCAAATCATCAAGACGGCCACCATCCCAGCTAAGCTTTGCAAAAGGGAGAGCTCCAAGCAGTTCCACAACTCAAAAATCAAGTTCCCATTGGTTTACAGGAAAGTCAGGCCACCCACCAGGAAGCTTAAAACCACATACAAGGCCAAAAAGCCGAACTTGTTTATGTAA 1038 0.4855 MSEEGKNKGVVTNSPNQPYYGTFQGVANYYPTAPPPPPQPHPVVGFPQPIPPPATYGGHYYQGYQTVLGYAVVEGRPIREHRLPCCGLGLGWFLFITGFFLGGIPWYAGTLVLLCVQMDYREKPGLVACTVASIIAVIAVTLGVTNKAHDXEGQRHQSPSCVHLLSEMVAFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVYRKVRPPTRKLKTTYKAKKPNLFM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0527 345 FunFam 60S ribosomal protein L18a 168 238 - -
Lele33g0527 345 Hamap 50S ribosomal protein L18Ae [rpl18a]. 173 236 IPR028877 -
Lele33g0527 345 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 174 295 IPR023573 GO:0003735|GO:0005840|GO:0006412
Lele33g0527 345 MobiDBLite consensus disorder prediction 30 49 - -
Lele33g0527 345 MobiDBLite consensus disorder prediction 1 23 - -
Lele33g0527 345 SUPERFAMILY RplX-like 238 313 - -
Lele33g0527 345 FunFam 60S ribosomal protein L18a 239 314 - -
Lele33g0527 345 PANTHER 60S RIBOSOMAL PROTEIN L18A 170 344 IPR028877 -
Lele33g0527 345 Gene3D - 238 310 - -
Lele33g0527 345 MobiDBLite consensus disorder prediction 1 25 - -
Lele33g0527 345 Gene3D - 162 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0527 Lele-ChrLele33 3492604 3498822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0527 167 345 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.620 4.99e-121 346