Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0526 ATGTCAAAAGAGTCGATTCTCACAGTTTGCCTAGTGAGGGTTTTCTCGTCGTTCGAGCAGGAACACACAAGCCGCAAGCACAATCTTTGTGTTCTACCCCGTTGCCTAGCAATCATGTCAAGGAGAAAGGTTAGAGAGCCAAAGGAAGAAACTGTTACTCTTGGCCCAACTGTCAGAGACGGTGAACATGTTTTTGGCGTAGCCCATATCTATGCATCATTTAATGATACATTCATTCACGTGACTGATTTGTCTGGAAGGGAAACCCTTGTTCGTATTACAGGTGGAATGAAGGTCAAGGCTGACAGAGATGAGTCTTCCCCTTATGCTGCTATGCTTGCAGCACAGGATATATCTGCTAGATGCAAGGAGCTGGGCATAACTGCTCTTCATATCAAGCTCCGTGCTACTGGTGGAAACAAGACAAAAACACCTGGTCCTGGTGCTCAGTCTGCTCTCCGAGCCCTTGCTCGTTCAGGAATGAAAATTGGCCGTATAGAGGATGTGACTCCGATCCCATCAGACAGCACCAGGAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAA 567 0.4709 MSKESILTVCLVRVFSSFEQEHTSRKHNLCVLPRCLAIMSRRKVREPKEETVTLGPTVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDISARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0526 188 ProSitePatterns Ribosomal protein S11 signature. 153 175 IPR018102 -
Lele33g0526 188 FunFam 40S ribosomal protein S14 39 188 - -
Lele33g0526 188 Hamap 30S ribosomal protein S11 [rpsK]. 41 185 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele33g0526 188 Pfam Ribosomal protein S11 66 184 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele33g0526 188 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 41 183 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele33g0526 188 SUPERFAMILY Translational machinery components 61 186 - -
Lele33g0526 188 MobiDBLite consensus disorder prediction 168 188 - -
Lele33g0526 188 Gene3D Ribosomal protein S11 39 188 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0526 Lele-ChrLele33 3489401 3492329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0526 39 177 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.209 1.16e-91 262