Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0520 ATGCAAACTCAGGACACGTCATTTTCCTGTGCAAAGAACTTCTTCCAGAGGTTCTGGTTAGATGAAATCAATATGGGAAGTTTCTCTCATAGCAACTTTCTGTATAATGATCTTCTTCCATCTCTTGGAGCTCAAATGGTTCAGGAAATCAAACTCAGAAGATACATAATCTCCCCTTTGGATCCGAGATATAGGGCTTGGGAGATGATATTGGTTGTTCTAGTCATTTACTCAGCCTGGATATGCCCCTTTGAGTTTGCCTTTCTGTCTACAAAGCAAGATGCATTGTTCATCATCGACAACGTTGTCGACGCCTTATTCGCCATCGACATCATGCTCACATTCTTTGTGGCATATTTAGATAGTCAGTCTCATCTCCTTGTTGATGATCCCTGGAAAATTGCAATCAGGTACATATCAACATGGTTTATTTTTGATGTCTGCTCAACAGCACCATTTCAGAGTATTAGCCTCCTCTTCACAAACCATAGCAGTGAGCTTGGCTTTGATCTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGAGTGAGCTCTCTGTTTGCAAGACTTGAGAAAGACATTCGCTTTAACTATTTCTGGACCAGGTGCATAAAACTCATTGCTGTAACATTGTTTGCTGTTCACTGTGCCGGATGCTCCTGCTATCTAATTGCAGAAAAGTATCCTGATTCTAAAAGGACTTGGATTGGTGCAACACACCCGAATTTCAAAGAAGAAGGTCTGTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTAACACTTACTACCACTGGCTATGGAGATTTACATGCTCAAAACCCTGCAGAGATGCTGTTTGACACAGTTTTCATGCTGTTCAATTTGGGACTAACATCATACATCATTGGAAACATGACAAACCTTGTGGTTCACTGGACCAGCCACACCAAAACTTTTAGAGATACTATTGGAGCAGCATCTGAGTTTGCATCAAGGAATCATCTGCCACATCACCTACAAGATCAAATGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAACAAGAAACATTAAATGGTCTGCCTAAGGCTATTCGTTCAAGCATTGCAAATCATCTCTTCTTTCCTATTGTGAAGGGGGCCTACCTATTCCATGGAGTTTCCCATGACTTCCTTTTCCAACTGGCCTCAGAAATGGAAGCTGAGTATTTTCCACCCAAGGAAGATGTGATACTGCAAAATGAGGTTCCTACAGATCTTTACGTGCTTGTTTCAGGGGCAGTGGATCTTGTTCGCCACATGGATGGGTATGATCAAGTTGTCGGGAAGGCAGTTTTAGGAGAAACATTTGGAGAGATTGGGATATTCACCCCCAGACCACAACCGTTCACTGTTCGGACTGCAGAGCTTTCTCAAATTTTACGACTCAACAAAACTTCATTAATGAAGGCTGTTGAAGCATATCCAGAAGATTCAAAAATTATAATGGATAACTTTGTCATGGTAAATAGGAAATACGACAGCCTCATAGACAGATAA 1536 0.4147 MQTQDTSFSCAKNFFQRFWLDEINMGSFSHSNFLYNDLLPSLGAQMVQEIKLRRYIISPLDPRYRAWEMILVVLVIYSAWICPFEFAFLSTKQDALFIIDNVVDALFAIDIMLTFFVAYLDSQSHLLVDDPWKIAIRYISTWFIFDVCSTAPFQSISLLFTNHSSELGFDLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLIAVTLFAVHCAGCSCYLIAEKYPDSKRTWIGATHPNFKEEGLWDRYVTAIYWSIVTLTTTGYGDLHAQNPAEMLFDTVFMLFNLGLTSYIIGNMTNLVVHWTSHTKTFRDTIGAASEFASRNHLPHHLQDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSSIANHLFFPIVKGAYLFHGVSHDFLFQLASEMEAEYFPPKEDVILQNEVPTDLYVLVSGAVDLVRHMDGYDQVVGKAVLGETFGEIGIFTPRPQPFTVRTAELSQILRLNKTSLMKAVEAYPEDSKIIMDNFVMVNRKYDSLIDR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0520 511 FunFam Potassium channel KAT3 66 306 - -
Lele33g0520 511 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Lele33g0520 511 PRINTS EAG/ELK/ERG potassium channel family signature 100 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g0520 511 PRINTS EAG/ELK/ERG potassium channel family signature 111 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g0520 511 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g0520 511 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g0520 511 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g0520 511 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele33g0520 511 SUPERFAMILY cAMP-binding domain-like 309 497 IPR018490 -
Lele33g0520 511 CDD CAP_ED 382 495 IPR000595 -
Lele33g0520 511 Gene3D - 65 305 - -
Lele33g0520 511 Gene3D Jelly Rolls 376 509 IPR014710 -
Lele33g0520 511 Pfam Cyclic nucleotide-binding domain 402 486 IPR000595 -
Lele33g0520 511 SUPERFAMILY Voltage-gated potassium channels 59 304 - -
Lele33g0520 511 FunFam Potassium channel KAT2 370 506 - -
Lele33g0520 511 SMART cnmp_10 382 499 IPR000595 -
Lele33g0520 511 Pfam Ion transport protein 65 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele33g0520 511 Gene3D Helix hairpin bin 306 372 - -
Lele33g0520 511 PANTHER POTASSIUM CHANNEL AKT1 30 501 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0520 Lele-ChrLele33 3437141 3441107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0520 7 508 Ion Channels AT5G46240 71.514 0.0 774