Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0508 ATGGCCGACGAATCCAATACCACTTGCTGGTCTTTCCTGGACTTTCGACAGTTTTATGATGCCAAGTCTAATGAGAAAAAACTATTGGAGAACGGCGAGAGGGTAGATGAAAATACTCATCCCAAAAGGACTCCGGAGACTACTATCTTTGAACAGTTTCAAAGCCAGGGACAGAATTCAACTCATTCGAATGGATTTTCATCGAATCATCTGGACGAAAGACCGCAAAAGCCTTTGCTTCCACCTTTTGAATCAGCTGATATGCGTGCTTTAGGAGAGAGTTTATGTAGGGATATTATTCGTGGGAGCCCGGATGTTAAGTGGGAAAGCATCAAGGGTTTAGACAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAGGTACTTTACGGGTTTATTATCACCGTGGAAAGGGATTCTTTTGTTTGGCCCTCCTGGGACTGGGAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAAGACTACGTTTTTCAATATTTCAGCATCATCTGTTGTTAGCAAATGGCGAGGTGATTCTGAGAAGTTGGTGAGGGTTTTGTTTGAGTTAGCTCGGCACCATGCACCCTCAACAATATTTCTTGATGAAATTGATGCAATCATCAGTCAACGTGGTGAAGCGCGCAGTGAGCATGAAGCAAGTAGACGGCTTAAGACTGAGCTACTCATACAGATGGACGGTTTGACAAAAACCAATGAACTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAACTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTGGTACCACTTCCAGAACCAGAAGCAAGAAGAGCGATGGTTGAGGAACTGCTTCCGCCACTTGATGGTGAGGAGCTGATCCCTTATGATTTCTTGGTGGAGGAAACAGAAGGATATTCAGGCTCAGATATTCGGTTACTTTGTAAAGAGGCCGCAATGCAGCCCTTGAGACGCCTCATGTCACAACTTGAACAGAGACAAGAGGAAGTGGTTCCTGAAGAAGAGTTGCCAGGAGTGGGGCCAGTAAGAGCGGAAGATATAGAGGTAGCTTTGAAGAACACACGTCCATCTGCTCATCTGCAAGCCCCCAAATATGAAAAGTTCAACGATGATTACGGTAGTCAGATTCTTCTTCATTGA 1176 0.4515 MADESNTTCWSFLDFRQFYDAKSNEKKLLENGERVDENTHPKRTPETTIFEQFQSQGQNSTHSNGFSSNHLDERPQKPLLPPFESADMRALGESLCRDIIRGSPDVKWESIKGLDNAKRLLKEAVVMPIKYPRYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMVEELLPPLDGEELIPYDFLVEETEGYSGSDIRLLCKEAAMQPLRRLMSQLEQRQEEVVPEEELPGVGPVRAEDIEVALKNTRPSAHLQAPKYEKFNDDYGSQILLH 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0508 391 PANTHER AAA DOMAIN-CONTAINING 46 386 - -
Lele33g0508 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 373 IPR027417 -
Lele33g0508 391 SMART AAA_5 141 278 IPR003593 -
Lele33g0508 391 MobiDBLite consensus disorder prediction 54 83 - -
Lele33g0508 391 MobiDBLite consensus disorder prediction 54 71 - -
Lele33g0508 391 FunFam Katanin p60 ATPase-containing subunit A-like 2 104 288 - -
Lele33g0508 391 Pfam AAA+ lid domain 304 339 IPR041569 -
Lele33g0508 391 Gene3D - 104 381 IPR027417 -
Lele33g0508 391 Gene3D - 277 366 - -
Lele33g0508 391 FunFam Katanin p60 ATPase-containing subunit A-like 2 277 366 - -
Lele33g0508 391 CDD AAA 112 276 - -
Lele33g0508 391 Pfam ATPase family associated with various cellular activities (AAA) 145 275 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0508 Lele-ChrLele33 3343866 3348951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0508 139 349 Calmodulin-binding Proteins AT3G56690 35.514 1.41e-30 122