Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0489 ATGGACGACCTCTTCACCGTCGGCGATTTCCCTTACCACGTGGCCCCTTTTCCTGACACCTCTGACCTTTACACCCACCCCATGCCGGCTTTTCACCCTCCTGACGACGCCGACCACCGCCAGCTTCTCAACCCCCATCCACAGAAGCTCCGGCCCATCCGGAGCCTCGACCGGTCTTCTTCTCCGCCATCACTGGTCACCGAGATTCCTGAGAATGGAGGGTTCGCAGGAGCGTCTAACGATGTGGGTTACCTTTGTCATCAGTCAAGTCAGAATCTTGAGTCTCTTGGTCAGGGAGTCGAGTCTTGCGAGGAGCTGAGGAAGGAAGCTGCCGTTGATGTTGCCGGAAATGATTGCCTTCAGACGGAGACTCCTGCGGTGCTCGGAAAGTGTCATACTTGTGACCCGAATGCCGATGGGTTTAAGTTGAAGGAGGAATCTGGTTCATCCCGGGACAATGATGACGATTCATCTGAAAGTGTGGAAGAACCCGGGAGTGGAAAGGAAAGAGAGAAGACGATCACAAAGTTTGAAGCTTTTCTAGAAAATTTGGCGACGAAGGTGATGGAAAAGCAAGAGCAGATGCATAACCAACTGCTGGATATGATAGAAACGAGAGAAAGGGAAAGGGCTATGAGAGAAGAATCTTGGAAGCAAAAGCAGATGGAAAGAATTAAAAAGGATGAGGAGGCGAGAGCTCAAGAAAAATTGAACAACCTAGCTCTGATATCATCAATTCAGAATCTACTGGGCCATGAAATTCCAATTCCCCAGCTGGCAGCAACCAGCTCAAGAGAGGAGGACGAAGAAGGCAAAGTGAACATCCAAAGAGATTTCAAGAGTGATCAGAGTAACAATAATAGATGGCTAGAAGCTGAAGTACAAGCGCTCATAACTCTAAGAACTTCTTCAGAACGTGAATTTCGTGGGGCGGGACCCAAATTATCTCTATGGGAGGAGATATCTAAGACAATGCATAATATGGGTTACAGTCGTTCTGCAAAGAAGTGCAAGGAGAAATGGGAAAACATCAATAAGTATTATAAGAAAACAATGGAGAGTAGGAAGAAGCGACGACTAAATAGTAAAGCTTGTCCATGCTTTGATGAGTTGGACATTGTGTACCGAAATCAGCTCCCGAATATAGGGAATGCCGCCTTGAGCGACACCTCAATGTCATCAAAGACCAAAAAGGAATAA 1200 0.4725 MDDLFTVGDFPYHVAPFPDTSDLYTHPMPAFHPPDDADHRQLLNPHPQKLRPIRSLDRSSSPPSLVTEIPENGGFAGASNDVGYLCHQSSQNLESLGQGVESCEELRKEAAVDVAGNDCLQTETPAVLGKCHTCDPNADGFKLKEESGSSRDNDDDSSESVEEPGSGKEREKTITKFEAFLENLATKVMEKQEQMHNQLLDMIETRERERAMREESWKQKQMERIKKDEEARAQEKLNNLALISSIQNLLGHEIPIPQLAATSSREEDEEGKVNIQRDFKSDQSNNNRWLEAEVQALITLRTSSEREFRGAGPKLSLWEEISKTMHNMGYSRSAKKCKEKWENINKYYKKTMESRKKRRLNSKACPCFDELDIVYRNQLPNIGNAALSDTSMSSKTKKE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0489 399 Coils Coil 189 209 - -
Lele33g0489 399 CDD GT1 287 351 - -
Lele33g0489 399 PANTHER FI21293P1 126 389 - -
Lele33g0489 399 FunFam Trihelix transcription factor GT-2 289 350 - -
Lele33g0489 399 Coils Coil 219 239 - -
Lele33g0489 399 Pfam Myb/SANT-like DNA-binding domain 287 372 IPR044822 -
Lele33g0489 399 MobiDBLite consensus disorder prediction 141 173 - -
Lele33g0489 399 ProSiteProfiles Myb-like domain profile. 281 345 IPR001005 -
Lele33g0489 399 Gene3D - 289 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0489 Lele-ChrLele33 3157130 3159233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0489 166 377 Trihelix Transcription Factor Family AT5G47660 40.529 2.51e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele33g0489 Myb_DNA-bind_4 3.2e-19 CL0123