Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0487 ATGGCCTCGTCAAGGGGCCAGCGTGGCGGTGGTGGGAGAGGAGAGCGAATCTTTTCGCTTACGACCGTCGGAAACATGATGAAGAAGGCGTTACCGCCGAAGGCGAGGATCTCTGCAGACGCGAACGAAACGGTCGAACAATGTTTGACAAAGTTCGTGGACTCTGTCACCATCGAAGCCACCAAGAATTGCAACAACAATGGGCTCTCAGAGCTCACCGGCGACGACATCATCTCGGGGCTGGCCAAGCTCGGATTCTCTGATTACTTGGAACCACTCTACGATTACCTGGAGAAGTATAGGAAGCTGAATGAGCCAGAGCCGAGTACTAGTGCTGTTCCGGTAGTGCTGCGCCACCAGATCAGCGACGGCGACTATCAGAATGGGATTCTTGGGGTTGGAACTGCGGAGGATTTTCAAGGCTTGCCCGCTCTCATTTTGCACAAGATTTACTGA 456 0.5351 MASSRGQRGGGGRGERIFSLTTVGNMMKKALPPKARISADANETVEQCLTKFVDSVTIEATKNCNNNGLSELTGDDIISGLAKLGFSDYLEPLYDYLEKYRKLNEPEPSTSAVPVVLRHQISDGDYQNGILGVGTAEDFQGLPALILHKIY 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0487 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 21 79 IPR003958 -
Lele33g0487 151 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 106 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele33g0487 151 Gene3D Histone, subunit A 12 114 IPR009072 GO:0046982
Lele33g0487 151 SUPERFAMILY Histone-fold 15 107 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0487 Lele-ChrLele33 3151725 3152180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0487 1 112 CCAAT-HAP3 Transcription Factor Family AT4G14540 40.000 3.24e-25 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele33g0487 CBFD_NFYB_HMF 2.3e-09 CL0012