Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0424 ATGGGGAAATCTGGGGGTAGAAAAAAGAAGGGGGGTTCAAATCAAGTTGTTCCTGATAATTCAGCTCCAAGTTCTAATGGTGGTGCGGATTTAGACTCTTCAATCTTTTTGAAAAGAGCCCTTGAGCTCAAGGAAGAAGGGAATAAGAGGTTCCAAAACAAGGACTATGCTGGTGCTCTTGAGCAGTATGAGAATGCTCTTCGACTAACCCCTAAGACCCACCCTGAGAGAGCCGTCTTTCACAGCAACAGAGCGGCATGCTTGATGCAAATGAAGCCCATAGATTACGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTCCAGCCCCAATACGTCCGGGCACTTCTTCGGAGGGCTCGGGCATTTGAGGCTATAGGGAAATATGAAATGGCCATGCAGGATGTACAAGGGTTACTGGCAGCTGACCCTAATCATCGGGATGCTCTGGATATTGACCGGAGACTGAGGACAGCACTAGGTCCTCGCCAGGAATCCCAGCAAGATCTTCAGAGCCGGCCCTCCCCTGCTGCTCTCGGTGCTTCTGCAGTCCGTGGTGCCCCTATTGCTGGTTTAGGGCCATGTTTACCAGCCAGGCCAGTATCAAAGAAAGGGGCAAACTCAGCAGGTGGATCAGTTGCTCCTGCTAACAGTAAACCAGAGAAGTCCCAACCGACATTAGTTACTGAAAATGGCCCTGAGACCAAGTTACAAATGCCAAAAGTTGCGTTGAAGCCTTCAAATGCTTCAGCAAGATCACTGAACCCAAGAAAAGAGAACCACAATGAACTGTCATCGCATTCATCAATTTCACATGGACAGCATTTAGAATTTGCAATTCAGTGGAGGCCATTGAAACTTGTTTATGATCATGACATTAGGCTTGCTCAGATGCCAGCGAATTGCAGTTTTAGAACACTGAGAGATATAGTGAGTAAAAGATTTCCATCTTCAAAGTCAGTTCTGATCAAGTATAAGGATAGCGATGGTGATTTGGTGACAATAACCTCTACTGATGAACTTAGACTGGCAGAATCTAGTGCTGATAGCCGTCTTATAAAAGAGCCTGATGCTGATAAAAGTGATTCAGTTGGCATTTTGAGACTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGAAGTAAAACCTGTTGAGAGTGAAGGCATCAAGGGAGATGAGAGTGGGTCACATACTTCCCAAAGTGAATCTGTCCCAGAGGCTTTGGAGACTGAGGTTGATAAGGTGGGGAAAGAAGCTCCCAAGGAGAAACCAGTAGCTACAGACGATGCCGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCTCATGTGGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCAGAGGCACTTGAGGAAACAGTAACTAGTGAGGAGGCTCAAGATCTCTTTAACAAAGCTGCTTCGAAGTTCCAGGAGGTAGCTGCTCTGGCATTCTTCAATTGGGGAAACATTCACATGTGTGCAGCTAGGAAACGAATTCCCTTGGACGAGTCAGGCGTGAAGGAAAAAGTGGCAGAACAGCTTCAAGTGGCTTATGACTGGGTCAAGGAAAAATATTCGTTGGCAAGAAAGAAGTACGAGGAAGCCCTTTTAATAAAACCAGACTTCTATGAGGGATTGCTAGCTCTGGGGCAGCAACAATTTGAAATGGCCAAACTTAATTGGTCATTTGCGCTTGCTAAGAAGATGGATTTATCAGCCTGGGATTCTTCGGAGACGCTTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCGACTGATATGTGGGAAAAGCTGGAGGAACAGAGGGAAAATGAGCTAAAAGATCCTAGTGCGAGCAAGAAAGAGGAACTTCTGAGAAGAAGAAAAAAACAGGGAGGCACTACCGAAGGTGAGACCTCTGCAGTCGGTGGTCATGGTGAAATATCTGCAGAAGAAGCTGCAGAGCAAGCAGCTGTCATGAGATCACAGATTCACCTCTTCTGGGGCAATATGCTATTTGAAAGATCCCAAGTGGAATGCAAATTAGGGATGGGGGGTTGGAAGAATAATCTGGATACAGCTGTTGAGCGTTTTAAACTTGCAGGAGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAATGGAGATGCAAAGGAAGATGAGAAAAAGATTCAGAACCCCCAACCCAGCAAGAATGGTGAAACTGACAAGACCAGTTAG 2295 0.4584 MGKSGGRKKKGGSNQVVPDNSAPSSNGGADLDSSIFLKRALELKEEGNKRFQNKDYAGALEQYENALRLTPKTHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQYVRALLRRARAFEAIGKYEMAMQDVQGLLAADPNHRDALDIDRRLRTALGPRQESQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVSKKGANSAGGSVAPANSKPEKSQPTLVTENGPETKLQMPKVALKPSNASARSLNPRKENHNELSSHSSISHGQHLEFAIQWRPLKLVYDHDIRLAQMPANCSFRTLRDIVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESSADSRLIKEPDADKSDSVGILRLHIVEVSPEQEPPLPEEEEVKPVESEGIKGDESGSHTSQSESVPEALETEVDKVGKEAPKEKPVATDDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFNKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGVKEKVAEQLQVAYDWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSAWDSSETLQLFDSAEEKMKAATDMWEKLEEQRENELKDPSASKKEELLRRRKKQGGTTEGETSAVGGHGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKNNLDTAVERFKLAGASEADISLVLKNHCSNGDAKEDEKKIQNPQPSKNGETDKTS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0424 764 CDD PB1 286 355 - -
Lele33g0424 764 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Lele33g0424 764 PANTHER PROTEIN CLMP1 1 753 IPR044517 -
Lele33g0424 764 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Lele33g0424 764 MobiDBLite consensus disorder prediction 383 400 - -
Lele33g0424 764 MobiDBLite consensus disorder prediction 202 269 - -
Lele33g0424 764 Gene3D Tetratricopeptide repeat domain 449 663 IPR011990 GO:0005515
Lele33g0424 764 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Lele33g0424 764 MobiDBLite consensus disorder prediction 415 438 - -
Lele33g0424 764 MobiDBLite consensus disorder prediction 212 234 - -
Lele33g0424 764 SUPERFAMILY CAD & PB1 domains 280 352 - -
Lele33g0424 764 Gene3D - 285 355 - -
Lele33g0424 764 SMART PB1_new 283 375 IPR000270 GO:0005515
Lele33g0424 764 MobiDBLite consensus disorder prediction 740 764 - -
Lele33g0424 764 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Lele33g0424 764 SMART tpr_5 40 73 IPR019734 GO:0005515
Lele33g0424 764 SMART tpr_5 78 113 IPR019734 GO:0005515
Lele33g0424 764 SMART tpr_5 114 147 IPR019734 GO:0005515
Lele33g0424 764 MobiDBLite consensus disorder prediction 375 438 - -
Lele33g0424 764 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Lele33g0424 764 MobiDBLite consensus disorder prediction 14 31 - -
Lele33g0424 764 MobiDBLite consensus disorder prediction 627 669 - -
Lele33g0424 764 Gene3D Tetratricopeptide repeat domain 37 164 IPR011990 GO:0005515
Lele33g0424 764 SUPERFAMILY TPR-like 489 586 IPR011990 GO:0005515
Lele33g0424 764 MobiDBLite consensus disorder prediction 627 655 - -
Lele33g0424 764 Coils Coil 609 636 - -
Lele33g0424 764 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0424 Lele-ChrLele33 2701752 2704046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0424 30 161 Calmodulin-binding Proteins AT3G25230 27.972 1.16e-10 62.8