Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0421 ATGAGTCAGCTTGGGGTAATATTGCAGGAATCGCTTCAGAGAGACCGGGAGGAAAGAACGATTCTGGGTTTGCTAACGGAGCAAATGGAATCTGTGAATAGGGATAATCATGATGATAGAGAGCCTCGAAGGAGACGGAGTTTAAAAGAGCGGCTAAGATTCACCGGAATGGGGTGTTGTGGGGCCACCTGGGGTTCCCGTCCGGCCTCCGTAAGGCACGATGAAGGAGAAGAAGATGAAGACGACGAACGGCGGCAGCTGCAGCAAAGGCTTCAAGAGACGAATCCGGGTCAAAGATCGAGCTCGTCAGACCCGGATTGCTTGAGCCCGAACCCATCGGGTTCGGGCATGAATCTTGCGGCGGCGTTGGCAGCGGAGCGTCAATTTCGGGGGACGCAAGAACCAGAAACTCAGAGGCAAGGAACCACCAGGAATAATTTCCGGCAGGGGGGAGCGGGAGAGGGAGCGGCTCCGGGGACTCCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGATAGGGAGGGAGGCGACGCGGAGGTGACGGTAACGGTGACTGAGAACGGAGGAGGGGGCAATGATACGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCGGCATTTATCCCATGTGGGCATACTTTTTGCAGGGTGTGCTCCAGGGAGCTGTGGCTGAACCGAGGGACCTGTCCCCTCTGTAACCGTTCGATCCTCGAGATTCTCGACATCTTCTGA 735 0.566 MSQLGVILQESLQRDREERTILGLLTEQMESVNRDNHDDREPRRRRSLKERLRFTGMGCCGATWGSRPASVRHDEGEEDEDDERRQLQQRLQETNPGQRSSSSDPDCLSPNPSGSGMNLAAALAAERQFRGTQEPETQRQGTTRNNFRQGGAGEGAAPGTPWRVSLMRLLEDREGGDAEVTVTVTENGGGGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0421 244 CDD RING-HC 196 233 - -
Lele33g0421 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 243 IPR013083 -
Lele33g0421 244 ProSiteProfiles Zinc finger RING-type profile. 196 234 IPR001841 -
Lele33g0421 244 SMART ring_2 196 233 IPR001841 -
Lele33g0421 244 MobiDBLite consensus disorder prediction 63 160 - -
Lele33g0421 244 Pfam Zinc finger, C3HC4 type (RING finger) 193 238 - -
Lele33g0421 244 MobiDBLite consensus disorder prediction 31 48 - -
Lele33g0421 244 SUPERFAMILY RING/U-box 190 241 - -
Lele33g0421 244 MobiDBLite consensus disorder prediction 134 149 - -
Lele33g0421 244 PANTHER OS01G0917900 PROTEIN 5 244 - -
Lele33g0421 244 MobiDBLite consensus disorder prediction 90 116 - -
Lele33g0421 244 MobiDBLite consensus disorder prediction 23 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0421 Lele-ChrLele33 2672067 2672801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0421 21 244 C3H Transcription Factor Family AT4G22250 48.485 5.18e-56 176