Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0416 ATGGAGGAGAATTCTCAAGGTCAAGGGATGGCTTTTGTGGGAGAGAACATTAGTGGTGGGGATAGTGGTCTAGTATGTTCTCAGATGATGATGAATATGCCTATAGTGACATCTCATCATCCAAGTGGTCATCATCATCCATTAATTAATCCTAATGCTAATACACAGCACACTAATTTAAACCCTACTAGTAATACTCTTTTCTTCCCCACACCTTGCACTATTAATAGTACCTCTGCCTCTTCCTCCTTTATTATGCTTCAAAACAACAACTTAAACTACGGCGGCAACAACACTGGTTTAAGCTTTGGCTGTTGTTTCATGGACATCGTCTTCGACCACAACGTTAACAGCAGCAACAACGATGGTAGTTCCTCTTCTTGTTCTTCAGTGAAGGCCAAGATCATGGCTCATCCTCACTACCTTCGTCTCCTCGCTGCTTACGTCAATTGTCAAAAGGTGGGCGCACCGCCGGAAATGGTGGCGAGGCTGGATGAAGCATATGTGGCGGCGGTGGCGGCAATGGGCGGAAACGGAGGTGGGTCAGGCTGCACGGGCGAAGATCCGGCGCTGGATCAGTTCATGGAGGCATACTGTGAGATGTTGACAAAGTACGAGCAAGAGCTTTCCAAACCCTTCAACGAAGCTATGTTCTTCCTTCAGAACGTCGAACGGGCACAATTTTCGCTGTGTTTGCTAATGATGATTAATTCATTTGTCTTATCATCAGCTTGTAATGAGAATACTGATAGGACAGAATCATCTGAAGATGACATGGCTCTCCAGAGCGGCGGTAGCATGGTGGATCCGCAGGTGGAGGATAAGGAACTGAAGGACCAGCTTCTGAGGAAGTACAGTGGATACTTGGGCAGTCTGAAGCAGGAGTTCATGAAGAAGAGGAAAAGGGGGAAGCTGCCTAAAGAAGCAAGGCAACAATTACTTGATTGGTGGAACGGACACTATAAATGGCCTTACCCTTCTGTCAAGAGAGATAATATGCCAATTACCCAACTAGGTTCAATGAATCTTATTTCTGTCTCAACTCATGTGCGTGCTTATTTGGAATCACAAAAGTTGGCACTTGCAGAATCAACAGGGCTCGATCAGAAGCAAATAAACAACTGGTTCATTAATCAGAGGAAACGTCACTGGAAGCCTTCAGAAGACGTGCAGTTCCTGGTGGTTGATCCAGTGCACCCTCATCACCACTTCATGGACAACGTTCTTGGAACTCCATATCCCATGGATTTCTCTCAAACTATGCTCTGA 1269 0.4571 MEENSQGQGMAFVGENISGGDSGLVCSQMMMNMPIVTSHHPSGHHHPLINPNANTQHTNLNPTSNTLFFPTPCTINSTSASSSFIMLQNNNLNYGGNNTGLSFGCCFMDIVFDHNVNSSNNDGSSSSCSSVKAKIMAHPHYLRLLAAYVNCQKVGAPPEMVARLDEAYVAAVAAMGGNGGGSGCTGEDPALDQFMEAYCEMLTKYEQELSKPFNEAMFFLQNVERAQFSLCLLMMINSFVLSSACNENTDRTESSEDDMALQSGGSMVDPQVEDKELKDQLLRKYSGYLGSLKQEFMKKRKRGKLPKEARQQLLDWWNGHYKWPYPSVKRDNMPITQLGSMNLISVSTHVRAYLESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQFLVVDPVHPHHHFMDNVLGTPYPMDFSQTML 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0416 422 Pfam ELK domain 276 297 IPR005539 GO:0003677
Lele33g0416 422 SMART HOX_1 298 390 IPR001356 GO:0003677
Lele33g0416 422 Pfam Homeobox KN domain 316 382 IPR008422 GO:0003677|GO:0006355
Lele33g0416 422 Gene3D - 301 390 - -
Lele33g0416 422 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 65 390 - -
Lele33g0416 422 SMART KNOX2_2 181 232 IPR005541 GO:0003677|GO:0005634
Lele33g0416 422 SUPERFAMILY Homeodomain-like 356 400 IPR009057 -
Lele33g0416 422 Pfam KNOX2 domain 185 228 IPR005541 GO:0003677|GO:0005634
Lele33g0416 422 ProSitePatterns 'Homeobox' domain signature. 361 384 IPR017970 GO:0000981|GO:0006355
Lele33g0416 422 MobiDBLite consensus disorder prediction 250 273 - -
Lele33g0416 422 SMART ELK_2 276 297 IPR005539 GO:0003677
Lele33g0416 422 SMART KNOX1_2 129 173 IPR005540 GO:0003677|GO:0005634
Lele33g0416 422 ProSiteProfiles ELK domain profile. 276 296 IPR005539 GO:0003677
Lele33g0416 422 CDD homeodomain 299 387 IPR001356 GO:0003677
Lele33g0416 422 ProSiteProfiles 'Homeobox' domain profile. 355 386 IPR001356 GO:0003677
Lele33g0416 422 Pfam KNOX1 domain 131 167 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0416 Lele-ChrLele33 2619329 2624975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0416 131 422 Homeobox Transcription Factor Family AT1G62360 65.763 7.06e-114 337