Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0413 ATGCAACGCGGCGACACCTATACGTCGATTGGTTATAAGACTTTCGCCAGTCTCACCTACGAGCAATGGGTGAGCAGATTCAACCTTCTCCACCCTAACCAGATACCCACGGGGACCAGGGTTCAGTGTTACTGTGAATTGCTCCTGCGGCGATGCACACGTGTCCTCGAATTACGGCTGTTCTTGACGGATGCAATTCGGTCCGGCGAGGGATTGTCGAAGGTTGCGGTGGAGAATGGTGTTCCGGCCGAGTTGCTTCAGAGGTACAATCCTGGGTCCGATTTCAGCGCCGGCCTGGTGCTTGTGCCGGCTAGAGATGAAAATGGAATCTATCCACCATTGAAGTTGAGATCAGGTGATGATGATAAGGATACTGAACTGCTCTATTCAATAGGAATTTCTGGTGAAACTGTTGCTGGTATAGTTGTTGGAAGTATTTCTGGGACCTTACTCTTGGGACTACTATATTTCGGGCTATATAGAAGAAAGAGAGTGGCAGATGCATCCCTTTTCACAAATCCACTAGTAGTTGAAGATAAGTATTGTTTTGGAAGCTGCTCAGAGAAGCTAACAGAATTGGTTGGCGGTGCTTCTCCTAGATTGACATAACTTCGAAATGAGATTTTTCCACAACAGCTTGTGATGTTGTATGAGGGTTTAATAGCTATGTTATTTGGATTAATCAATGATCAAAATTTAAATACCAGCAAGAAGCTAGCATACATCCATGAGCAAACAGTTCCTGTCTACATCCATGGAGACATTAAATCTCCAAACATATTGATTGACAAAAACTTCCGTGGAAAGACAAATTTGATAGAATATGGAAGTTCTTCAATGCCATCACATCTTGTGGGTACTTTTGGCTATATGCCTCCAGAATATGCACAATATGGAGACTTTTCTCTCAAAACAGATGTATATGCATTTGGAGTTGTTCACTATGAACTCATATCCGCAAAGGAAGCTATTTTTGAAGAGGTTCTGAATCAGCAAATCCCAGAAGAAGAACTTCGTAAACTTGTTAAACCCACTCTCGGTGACAAGTATTCACTGTGA 1059 0.4297 MQRGDTYTSIGYKTFASLTYEQWVSRFNLLHPNQIPTGTRVQCYCELLLRRCTRVLELRLFLTDAIRSGEGLSKVAVENGVPAELLQRYNPGSDFSAGLVLVPARDENGIYPPLKLRSGDDDKDTELLYSIGISGETVAGIVVGSISGTLLLGLLYFGLYRRKRVADASLFTNPLVVEDKYCFGSCSEKLTELVGGASPRLTXLRNEIFPQQLVMLYEGLIAMLFGLINDQNLNTSKKLAYIHEQTVPVYIHGDIKSPNILIDKNFRGKTNLIEYGSSSMPSHLVGTFGYMPPEYAQYGDFSLKTDVYAFGVVHYELISAKEAIFEEVLNQQIPEEELRKLVKPTLGDKYSL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0413 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Lele33g0413 352 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 2 172 IPR044812 GO:0019199|GO:0045087
Lele33g0413 352 ProSiteProfiles Protein kinase domain profile. 128 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0413 352 Gene3D Transferase(Phosphotransferase) domain 1 232 352 - -
Lele33g0413 352 SUPERFAMILY Protein kinase-like (PK-like) 239 334 IPR011009 -
Lele33g0413 352 Pfam Protein kinase domain 235 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0413 352 SMART serkin_6 137 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0413 Lele-ChrLele33 2596287 2601851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0413 233 350 Receptor kinase-like Gene Family AT3G21630 50.000 1.51e-30 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele33g0413 Pkinase 5.3e-14 CL0016