Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0399 ATGTTTACTTTGATTGATTTTGGTCACGTGGAAGGCGCCGCACTATTCGGGGCGGGCGGTGCCATTCTTCTCCTCCTCCTCCTCTTGATAAGAAGCAGTCAAACTCTTTTCCTCACGAAACCTCCTTCCTCTTCCCCCATCTTTTCAACCCCTGACGCACCTTCTGACGTTTCTTCCTCTCTTCCCCTTGACAATCCTCCCCCCCAATCTCCCTCTTTCCGTGTCCATACGGGCCTGCAACTTCTTACTGCTCATACTGGGAGCGATCAGTCTACCGTGGACGACGGAGTTTCATCGGATGCTGAAATCAAGCGAGCCAAGAGTTCAACTGAGTTGGCGCAGCTGAAAGAGGAGCTTCAGCGTATGAATGAGGAAAACCTGAAGCTGAGGGACATGTTGAGCCACGTGAGCAGTAATTACTCGGCTCTGCAAATGCATCTCGTATCATTAATGCAGCAGCAGATTCAACAACGTACTCAGAGGACAGCAAATGAGGCTGTTCGATCAAAACCTGATGACAAGAGAGAAATTGTGCCGATGCCGCTTCTGGATTTGGGGCCTAGTAGTGGAACAGCTGAAGTAGATAACGAGGTCTCCAATTCAACTTCCGATGAAAGAACACGATCCACCACCCCTCCTCTTAACAACATCAATGGTAAAAATGAAAGAGAAGAGAGTCCAGACGAGTCAGATGTTCAGCCCCAAGGATGGGGCACTGGTCCTAACAAGCTTCAGAAGCCGAACCCCTCACCGAACTCCGCCGACCCATCAGCCAGTACCACCACCGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCAGAAGCACCCATGATCAGTGACGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCATGCCCTCGTGCTTACTATAGATGCACCATGGCGGTCGGTTGCCCAGTTCGCAAACAAGTACAGCGTTGCGCGGAGGACAGGACGATTTTGATAACTACCTATGAAGGAAGCCATAACCATCCGTTGCCACCGGCGGCGATGGCGATGGCATCAACAACCACGGCAGCTGCTAGCATGTTGTTGTCGGGTTCAATGTCAAGTGCAGACGGAATAATGAATCCGAATTTGCTGGCCAGAGCTATTCTTCCTTGTTCGTCGACTAGCATGGCTACGCTTTCGGCTTCAGCTCCGTTTCCTACCATAACATTGGACCTCACTCACATTTCAAACGGTAACATGAACAACCCTATGCAGTTCCAGAGACCACCGTTTCAGGTACCTAATTTCCAAGGGCAGGCTCAAGTTCAACAACCAACCGCGTCGGGTCAGCATCAGTTGGCTCAGGCATTTTCACAAGCACTTTACAATCAATCCAAGTTTTCCGGCCTTCACTTGTCTCAGGATATGGGTTCGTCGTCTTCATCTTCTTCCCAATTAGCCAACCAGCAACCTCCCAGGCCGGTGCAGCCAAGCCAACCGCCGCAGCCGTCGTTGGCAGACACCGTCAGCGCGGCCACTGCAGCCATCACCGCCGACCCAAACTTCACAGCAGCACTCGCGGCGGCCATCTCCTCCATCATTAATGGCGGCGGTGTTCCCCCGAGCAACAACAAAGCCAATAGCAGTGGCAATCCCAACATCCCCAGTGGCACCACAATCAGCAGTTTCTCAGGGAATCACTAG 1686 0.5196 MFTLIDFGHVEGAALFGAGGAILLLLLLLIRSSQTLFLTKPPSSSPIFSTPDAPSDVSSSLPLDNPPPQSPSFRVHTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELAQLKEELQRMNEENLKLRDMLSHVSSNYSALQMHLVSLMQQQIQQRTQRTANEAVRSKPDDKREIVPMPLLDLGPSSGTAEVDNEVSNSTSDERTRSTTPPLNNINGKNEREESPDESDVQPQGWGTGPNKLQKPNPSPNSADPSASTTTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSSTSMATLSASAPFPTITLDLTHISNGNMNNPMQFQRPPFQVPNFQGQAQVQQPTASGQHQLAQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLANQQPPRPVQPSQPPQPSLADTVSAATAAITADPNFTAALAAAISSIINGGGVPPSNNKANSSGNPNIPSGTTISSFSGNH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0399 561 MobiDBLite consensus disorder prediction 192 220 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 165 179 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 466 504 - -
Lele33g0399 561 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g0399 561 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g0399 561 MobiDBLite consensus disorder prediction 41 63 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 41 72 - -
Lele33g0399 561 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g0399 561 Coils Coil 98 132 - -
Lele33g0399 561 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele33g0399 561 MobiDBLite consensus disorder prediction 530 561 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 528 561 - -
Lele33g0399 561 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele33g0399 561 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 90 541 IPR044810 GO:0003700
Lele33g0399 561 FunFam probable WRKY transcription factor 31 268 345 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 159 277 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 466 486 - -
Lele33g0399 561 MobiDBLite consensus disorder prediction 232 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0399 Lele-ChrLele33 2514703 2517278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0399 75 530 WRKY Transcription Factor Family AT1G62300 56.000 5.22e-139 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele33g0399 WRKY 5.8e-24 CL0274