Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0391 ATGGAGTCCCAGAAGAACATGCCCGAGAATTCTATTTCTTCGTCTCCTCCTCCTTCTCCTCTTAGCAGTGTCGTTAACACTGATCACAGCGCTTCAGAACCATCTCCCCCTGCGAGACTTGCTCACTGGGGTCCCAATGCTGTGTCATCATCCGGGGTTCGGCCGTATCTCCGATCCAGGTCGCCTCGCTTTCATTGGACACCAGAACTCCATGAATGTTTCGTGCATGCAGTTAAGATGCTTGGTGGAGAACGCAGGGCAACGCCAAAGTTCATTTGGCAGCTGATGAACGTGAAGGGATTGCTAATCTCTCATGTTAAGAGCCACCTTCAGATGTACAGGAGCATGAAGCATGACTTAGAAGAATCAAAGAGGAGAAGTTTGGAACAAGAAGCTTTATATTCGGCAAGCCATGGCGAACAGAAGAATGTTTATGAGCAAGCAACTGAAGAATCCATCAACCTCGGAATTCTCGAACAGTATCATCCTGGAATCCCAGCACAATGAAATGAAACATATGAAACTGAAATTCAGTTTGGGTTTGACCATGGAAGGAATCATGGGACTGTGTCGTCGGCAATTTCCATGGGCGAGCAACAGAAGAGGCACACCTACATCGTCTTCAACGATCTCTTTAAGACCCTTCATGATGCCCAAGAGATGAATGATGCTGCAGAAAAGACAAGACCTTCTTTCACGACTTTTCCGGCTACGTTGGGGGTGGATTTGGTTTTGGGGGTGGATTTGGTTTTGGAGGCGGATTTGGATCCAGAAATGAAGGATATGGTGGTGGTTGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGTGGAGGGTGGTAGCAACTATTCTGATCCTAAACCGTTGGGGATTGGAGATTTGAGGGTCATGGCAATGACGTTAATAGCTCTTATACAAGTTGGAGAAGCTGTGGGAGTTTCTTTAGATGGAATGACAGTGGTGGAGGCACCGGTGGTGGGTATGGCCATGAAGAAGCATATGGGTGAGGAGGTAGGGGAAGATGAGAATGGAGGAGAAGGCAGTGGTAAGGTTGGTTTTGTTTTTGGAGAAGTCAATGCTCCAAGCAATGGTGATAGTGATGGAGGCGATGAAGGAGGGCAGGCAGTAGCGAAGGTGGAAGGAAGGATGGTGAAGACTGAAGAGCATGGGCATGGTGGGGGATGGGACTTGACGGGGTGGAAATCCAAACCATCAAATTAG 1218 0.4852 MESQKNMPENSISSSPPPSPLSSVVNTDHSASEPSPPARLAHWGPNAVSSSGVRPYLRSRSPRFHWTPELHECFVHAVKMLGGERRATPKFIWQLMNVKGLLISHVKSHLQMYRSMKHDLEESKRRSLEQEALYSASHGEQKNVYEQATEESINLGILEQYHPGIPAQXNETYETEIQFGFDHGRNHGTVSSAISMGEQQKRHTYIVFNDLFKTLHDAQEMNDAAEKTRPSFTTFPATLGVDLVLGVDLVLEADLDPEMKDMVVVEVEVEVEVEVVEGGSNYSDPKPLGIGDLRVMAMTLIALIQVGEAVGVSLDGMTVVEAPVVGMAMKKHMGEEVGEDENGGEGSGKVGFVFGEVNAPSNGDSDGGDEGGQAVAKVEGRMVKTEEHGHGGGWDLTGWKSKPSN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0391 405 SUPERFAMILY Homeodomain-like 59 116 IPR009057 -
Lele33g0391 405 Gene3D - 61 119 - -
Lele33g0391 405 MobiDBLite consensus disorder prediction 1 46 - -
Lele33g0391 405 MobiDBLite consensus disorder prediction 1 33 - -
Lele33g0391 405 MobiDBLite consensus disorder prediction 336 405 - -
Lele33g0391 405 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 44 148 - -
Lele33g0391 405 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 62 116 IPR006447 GO:0003677
Lele33g0391 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0391 Lele-ChrLele33 2469963 2474294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0391 52 114 G2-like Transcription Factor Family AT1G14600 69.841 4.23e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele33g0391 None None None