Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0379 ATGAGGCCGAAGCTACTCCGGACCGAATTTCTGCTCCGAAAGACTGCCGTCGAGGAGCTGATGGTTGAAGAAGCAATACGTTGTCGTTTGCTTGCCTGCTTTGCATTTGCGTCTTGCAGTCACGTTTCAGCGAAACGAGCACTTTCCCTAGCTCTACGTGCTTCCGGTTTGCTTCTTCAAAACGACACAGGATTATCCAAGTTCCAGAATAGCAAGCGTCCGCGGACGATCAGACCGTATCTCGAAAACAAAATGAGTGAATCAAATCACCACGCAAATTGCAAAGAGATGAGATCAGGTCAGAATGATAACAACCAGCTGCCATTCTCTGAAGATGAAGAGTCTCTCATTGCTAGGATGTTTAACTTGGTTGGAGACAGGTGGTCTCTTATAGCTGGGAGAATCCCAGGGAGGAGCGCAGAAGAGATTGAGAAGTATTGGACTTCAAAGTGTGCTTCATCGAGTGAGACATCAAGTTGTCATGCTGACACATAA 495 0.4687 MRPKLLRTEFLLRKTAVEELMVEEAIRCRLLACFAFASCSHVSAKRALSLALRASGLLLQNDTGLSKFQNSKRPRTIRPYLENKMSESNHHANCKEMRSGQNDNNQLPFSEDEESLIARMFNLVGDRWSLIAGRIPGRSAEEIEKYWTSKCASSSETSSCHADT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0379 164 CDD SANT 108 147 IPR001005 -
Lele33g0379 164 Pfam Myb-like DNA-binding domain 108 147 IPR001005 -
Lele33g0379 164 ProSiteProfiles Myb-like domain profile. 101 151 IPR001005 -
Lele33g0379 164 SMART sant 105 153 IPR001005 -
Lele33g0379 164 Gene3D - 108 163 - -
Lele33g0379 164 FunFam MYB-like transcription factor 108 150 - -
Lele33g0379 164 SUPERFAMILY Homeodomain-like 108 149 IPR009057 -
Lele33g0379 164 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 102 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0379 Lele-ChrLele33 2387885 2390652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0379 109 149 MYB Transcription Factor Family AT5G35550 60.976 3.13e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele33g0379 Myb_DNA-binding 3e-08 CL0123