Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0376 ATGGGCTGTCACAGTAGCAAGGAGAAAAAATCAAATGCGGAAATTAGTGGCTATGGATCAGCCACGGGTAGTGTTGGCAGTACCCATCAAAGTTACCACACCGTCCAGCCTCCTTCTACTCAAAGCCAGACTCAGATTCGAACATCAGAATCCAAGCCCCAACCGCCGCCGCCGCCGCCGCCTTCATCGCAGCCGCCCGTGACTGTCCCAGCGAAATCAACTTCCTCGAATGTCAGACCCCCGCAGCAGAAGCCAGAAGTTACGATTCTGGGAAAGCCTCTTGAAGATGTTAAGAAATTCTACACTCTGGGCAAAGAACTTGGGAGAGGGCAATTTGGGATTACCTATTTGTGCACTGAGAAGTCCACCGGCAGCACTTATGCGTGCAAATCGATATTGAAGAGGAAGCTTGCGTCTAAAGCTGATAAAGAAGATATGAAGAGGGAAATTCAGATTATGCAGCATTTATCTGGGCAACCGAACATCGTCGAGTTTAAGGGTGCTTATGAAGATAGATATTCTGTGCACCTTATAATGGAGCTTTGTGCTGGTGGGGAGCTATTTGACCGAATCATAGCTCAAGGTCACTATTCAGAGAGAGCTGCTGCATCAATTTGTAGAGCTATTGTTAATGTTGTGCACATTTGCCACTTCATGGGGGTGATGCATCGTGATCTGAAGCCTGAAAATTTTCTGCTTTCTAGCAAAGATGAAGGAGCGACGCTTAAGGCTACTGATTTTGGATTATCTGTTTTCATTGAAGAAGGTGGAATCTTTACTTCTCAGTTTCAATCGCATACTTGGAAGGTTTACCGAGATATGGTAGGCAGTGCTTATTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAAGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTCCTTAGTGGTGTACCTCCTTTTTGGGCTGATGTCAATTACAACGGGATAAAAGAAATGTTCGTTTTGATTGCAGAAAATGAAAAGGGAATATTTGATGCTATATTGGAAGGCAAAATTGACTTTGAAAGTCAACCATGGCCCTCAATATCAGACAGTGCTAAAGATTTAGTCAGGAAGATGTTGACACAGGACCCAAAGAAGCGAATTACTTCTGTACAAGTCCTTGAACACCCATGGATCAGAGAAGGTGGAGAGGCATCAGATAAGCCAATCGACAGTGCAGTTCTATCGAGAATGAAGCAATTCAGGGCAATGAATAAGCTCAAAAAGCTCGCGCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAGGAGATTAAAGGTCTCAAAGCAATGTTCACCAATATGGACACAGACAATAGTGGCTCTATCACCTATGAAGAACTGAAGACAGGTTTAGCCAGGATAGGATCACAACTGTCCGAGGCTGAAGTGAAGCAACTCATGGACGCTGCTGATGTTGATGGAAATGGAACAATCGACTATATCGAATTCATCTCAGCTACAATGCATAGGCACAGACTTGAGCGAGATGAGCACTTATACAAAGCCTTTCAGTATTTTGATAAGGATAACAGTGGGTTTATTACTATAGATGAATTGGAGACTGCTATGACAAAGCATGGAATGGGTGACGAAGCGACAATTAAGGATATAATATCCGAGGTGGATACAGATAACGATGGGAGAATAAACTATGAGGAATTCTGCACAATGATGAGGAGTGGAATGCAACATCAAGGACCACTTTTTTAA 1731 0.4321 MGCHSSKEKKSNAEISGYGSATGSVGSTHQSYHTVQPPSTQSQTQIRTSESKPQPPPPPPPSSQPPVTVPAKSTSSNVRPPQQKPEVTILGKPLEDVKKFYTLGKELGRGQFGITYLCTEKSTGSTYACKSILKRKLASKADKEDMKREIQIMQHLSGQPNIVEFKGAYEDRYSVHLIMELCAGGELFDRIIAQGHYSERAAASICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGGIFTSQFQSHTWKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWADVNYNGIKEMFVLIAENEKGIFDAILEGKIDFESQPWPSISDSAKDLVRKMLTQDPKKRITSVQVLEHPWIREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDNSGSITYEELKTGLARIGSQLSEAEVKQLMDAADVDGNGTIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGFITIDELETAMTKHGMGDEATIKDIISEVDTDNDGRINYEEFCTMMRSGMQHQGPLF 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0376 576 SUPERFAMILY EF-hand 425 565 IPR011992 -
Lele33g0376 576 MobiDBLite consensus disorder prediction 12 50 - -
Lele33g0376 576 ProSiteProfiles EF-hand calcium-binding domain profile. 537 571 IPR002048 GO:0005509
Lele33g0376 576 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Lele33g0376 576 FunFam Calcium-dependent protein kinase 5 187 394 - -
Lele33g0376 576 ProSitePatterns Protein kinases ATP-binding region signature. 107 134 IPR017441 GO:0005524
Lele33g0376 576 SUPERFAMILY Protein kinase-like (PK-like) 75 407 IPR011009 -
Lele33g0376 576 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Lele33g0376 576 ProSiteProfiles Protein kinase domain profile. 101 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0376 576 CDD STKc_CAMK 100 385 - -
Lele33g0376 576 Pfam EF-hand domain pair 434 494 IPR002048 GO:0005509
Lele33g0376 576 Pfam EF-hand domain pair 504 566 IPR002048 GO:0005509
Lele33g0376 576 ProSitePatterns EF-hand calcium-binding domain. 549 561 IPR018247 -
Lele33g0376 576 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Lele33g0376 576 MobiDBLite consensus disorder prediction 68 83 - -
Lele33g0376 576 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Lele33g0376 576 Gene3D Phosphorylase Kinase; domain 1 103 186 - -
Lele33g0376 576 FunFam Calcium-dependent protein kinase 1 103 186 - -
Lele33g0376 576 Gene3D Transferase(Phosphotransferase) domain 1 187 390 - -
Lele33g0376 576 FunFam Calcium-dependent protein kinase 1 394 569 - -
Lele33g0376 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lele33g0376 576 MobiDBLite consensus disorder prediction 51 67 - -
Lele33g0376 576 ProSiteProfiles EF-hand calcium-binding domain profile. 501 536 IPR002048 GO:0005509
Lele33g0376 576 SMART efh_1 540 568 IPR002048 GO:0005509
Lele33g0376 576 SMART efh_1 469 497 IPR002048 GO:0005509
Lele33g0376 576 SMART efh_1 505 533 IPR002048 GO:0005509
Lele33g0376 576 SMART efh_1 433 461 IPR002048 GO:0005509
Lele33g0376 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 95 561 - -
Lele33g0376 576 SMART serkin_6 101 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0376 576 Gene3D - 393 571 - -
Lele33g0376 576 Pfam Protein kinase domain 101 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0376 576 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Lele33g0376 576 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0376 Lele-ChrLele33 2375912 2380294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0376 1 576 EF-hand Containing Proteins AT4G04720 71.207 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele33g0376 Pkinase 5.4e-70 CL0016