Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0374 ATGCAGCATTTATCTGGGCAACCGAACATTGTCGAGTTTAAGGGTGCTTATGAAGATAGATATTCTGTGCACCTTATAATGGAGCTTTGTGCCGGTGGGGAGCTATTTGACCGAATCATAGCTCAAGGTCACTATTCAGAGAGAGCTGCTGTATCAATTCGTGGAGCTATTGTTAATGTTGTGCACATTTGCCACTTCATGGGGGTGATGCATCGTGATCTGAAGCCTGAAAATTTTCTGCTTTCTAGCAACGATGAGGGAGCAACGCTTAAGGCTACTGATTTTGGACTATCTGTTTTCATTGAAGAAGGTGGAATCTTTACTTCTCAGTTTCAATCACATACTTGCAATTTAATCAAATTTATGCCGAAGTGGTTAATCCCTGTTATAAATTTCAATCGTGTTCTTGTTTCTTTGATTATTGGGTAG 429 0.4009 MQHLSGQPNIVEFKGAYEDRYSVHLIMELCAGGELFDRIIAQGHYSERAAVSIRGAIVNVVHICHFMGVMHRDLKPENFLLSSNDEGATLKATDFGLSVFIEEGGIFTSQFQSHTCNLIKFMPKWLIPVINFNRVLVSLIIG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0374 142 SMART serkin_6 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0374 142 Gene3D Transferase(Phosphotransferase) domain 1 35 129 - -
Lele33g0374 142 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Lele33g0374 142 Pfam Protein kinase domain 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0374 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0374 142 SUPERFAMILY Protein kinase-like (PK-like) 2 108 IPR011009 -
Lele33g0374 142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Lele33g0374 142 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0374 Lele-ChrLele33 2365375 2365803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0374 1 107 EF-hand Containing Proteins AT1G50700 81.308 6.86e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele33g0374 Pkinase 1.4e-25 CL0016