Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0365 ATGGACGGCGATGAACCTCCTTGTGCATCGCCGTATGTTTCGTCCTCTTCGATCTTCAAGGACATATCCAATTTCAAAACACCCAAACGTCCCTCTTACAACCTCAACTTCCAATCCCCCGGTCAGAAGTTTTTCACTGCCTCCAAGCAAACGCCGCACTCCTCAGCGTTCCGTCGCTGGCCGTATATTGCTCCGCCATCTTCAGCTCGAACCAAGAAGTCCGCAGCGGCCGCCAGGAAACTCAAGGCATTTGAACTTGAGCAGTCTCAATCCTCGAGAAAAGCTGAAACGAAGAAAGAACAATCTCTTAAATCTCTAGCTAAGTCTATCACTGTCTGGCTCAATTTTTTGTTCGAAAACCCTGCTACGTGCGGATGTAACTTGTCCATCGCCGGTATTCAGATGGGGGATAAGCATTTTGAAGCTGAGGCGACGAAGGGCAAGAGGGATAGCGGTGCTGGGATTTCCATCGGGGTTGATAAAGCCTGGCGTACTCCGAAGAGGCAGAGGAAGATGTGGTCTCGGGCACAGGAGTGTGTTGTTAATGGAAATGCGCTCACAAATTGTATGTTTTCGAACTTGAGGAAATCTCTGGAGGATGTCTGCAGTTTCGATGATTTGAAGCAGCGAATGAGTGTTTATCTGAACTCGGGAAGTTGCAAAGAGATTTTTGAAGTTATGAATCAAGTCACCAAGAATATCGACGAAGGAAGGTTAAAGTTGAAGCCACATTGCCCCATCGTAACAGATCTCGGATTGAAAAATAAAGCCACAAGAATCCTTATGAGTTATAATCCAATTTGGCTGCGGCTTGGATTATATTTAATTTTTGGTGGTGACTCCTTGGTGCCTGACGGGGATGATGATTCTGAACAACAAATCACGTTTTTAAAAATGGTTATTGAGAAGCAATTTTTTTCACATGCGGGTTTGGCAAAAGCATATGCTTATAACAAGATGGTTGACGGCCTATACAGGCCAGGGTACTATGAAAATTTGGGGAATGTGATTTTAAAGAGAATTTTATTGCTTGTGCTTACTCTGGATAGAATTAAATCTCAGAGCTGCCTCTCACTCAAGTATGGTATCGATGGATTGGATGGGGGTTCCCCTTTGTTATTCAAAGCAGATTCTTGGATTAAATCGAGTGGTCAAGTCATCAGTGAATTCCTATCGTCAGAGGTAATGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTGATAATAGGCTACAAAGTATCTCATCAACAAGGGTCACTTGTCGAGTATGATTTCAAGGTCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAGCTCTGTAGAGCTATACAGCTCTTGCAGCATGATTCTTCTATCCTCACGAAAATTGTAGTTCCGTCAGATACTTATAAGAAGAATTTTGCCAACTGTGGCCTGGCCCTACAATACCTTAAGCAAGCTGGTGTGTTGCTGCATGATGAGGATAACATGATGATTGTAGCAGAGGATGTTGCCAATGGAGACAAGGAACTTGTTCTCTCGTTGCTGTGGAATATGTTTGTTCACTTGCAGCTACCTCTTCTGGTTGATAAATCAAGTTTATTAGATGAAATTGGTAAAATTCGAGGACTTGGTGTGGATGCCATTACCAATGCAAATTCAAGTTCATTGGAATTGCTTCTGAATTGGATTCAGGCAGTTTGTGAAAATTATGATTGTGGGATTGACAATTTTGATTCATTAGTTGATGGAAAAGCTATCTGGTGCTTACTCGATTATTATTTCCAGAAAGAACTTCCTAGTTCCTGCTTACGGAAGGAAGTCAATACGAAAAGTGGCCAGGAATCAATAATGTCTGTCAATGATTATTCAGATGCAGTGTACAATTTTATATTATCACAGAGGCTGACAAAATTATTAGGAAATTTTCCTGAGGTACTTCAAATAAGCGACCTACTTGAATATAATGGTGCTTCCAGTGATCGAAGTGTGGTGATATTGTTGGTTTTCCTTTCAAGGCAATTATTTGTCAAGAAAAATATGGATCAATTAAATTTCCATAAGCTCCTTGGTTGTGATTGCCAAAGTCTGTACCGGAAACATTTGAAGATGGAACAGTGTCTTTCTAATTCTGGAGCAGTACAAAAGCCGGACGCTTCTGATGTGCATGACAACGAAGATGCTGCAAAAAAATTCAAGGCCATCCAGACTTGGTGGCAAGATATGGCCGAAAGAAATCAGAAATCTTATATGAAACTGGCTGCCTGCAGTCCCATTGAAAGCAGCGCCAACTTCAGAAGAGAAACCGCTGCAATAACAATACAATCACATTTCAGAAGGTTGGTTGCTCGTCGCATGTTTCTCAAAATGAATAATGCTGTCTCTCTTTTGCAAACTGTTTTCCGAGCTTGGCTAGAAGTGAGGCAGGAGTCTTCGTTCACCTTTGTCCAAGGTCAAAATTTTTCATGTGCAATACACAAGAGGTCAGAAACATATAGGAGATACGCCATGTTTTTTGTTCAAAGGCTATCTTTTTTGAAGTCAAAGAGGTCAACATTACTGATTCAGCAAGCAGTGAGGAGTTGGCTTTCTTGGAAGCATCAGCGGGGATGTAGTATACTTCCTTATCTGACGACTTCAGATCCAGTGGCTGCTGCCATTATTGTTCAGAAATTTGTTCGTGGTTGGATGGCACGATCTAGATATAATCAAATGCTTGATCAGCAACAGAAAGCTTCATATTTGTACTTTCAAAAGGCTATGTTTGAACTTCAAACAGAAGCAGCCATTAGGATTCAACTTGCTTGGAAGAGGCATATGTTCTTCAAGTCTACTCAGAGGCACTTCTATGCGAAGATAATTCAAAGTAATTTTCGTAGGTGGCGATTAAGAAGAATATATTTGAATCAAATTCAAGCTGTTTTGAGAATCCAATGTTATTTTAGAGTGTCAATGAGTGTAAAGGCTTTTCAGCACTTAAAAATGGCATTTAAGGCAGCCATTGTCATTCAGTCTTTCATGCGTGCATGGATTGCACGGAAGGAAGCTTATGCACGTAGAAGTTGCATCGTTTCAATTCAAAGGCATTGCCGCACTTGGCTGGCGAGAAGGGACTTTATGTGCCAAAGAGGCGCTGCAATGAAGATCCAAAGCGTCATTCTCAGTCTGAAATACCAGAAGGCTCTCAATTATCGGAAAGATGCAGTGTTGCAGATTCAGCGTTTTATTAGGGGGCATTTATCACGAAATAGGCTCTTGGGTGGGGCATCTCGGCAACGCGCAATGATTCCAAGGGGTTGCATCCTAAGATCAGATGGTTACATTGGTTTTCAACTGGAAATATTTTTGTGTTCTGTTCTGAAATTGCAGCGATGGTGGAAGTGTGTCTTGTTACACAAGTTAAGAACAAAGTCTGCGATTATAATCCAGTCTTGTACTCGTGGGTGGATTGGTAGGCGAATAGCAACTGTTCGCAGACACCGTGTTGTTGTCATTCAATCCCATTGGAAAGGTTACCTTGCTCGGAAAGAGTCAAAAGAGCAGCTGCGAGACTTGCGCCTGAGAGTGAAGAAGTCTGCCAGAAATGTGGATGATAGCAAGCGTCTCATAAACAGACTTCTCGTAGCGCTTTCAGAGCTACTTCAAATGAAGAGTCTCAGTGGCATCCTTCACACTTGTGCAACTTTGGATGTGGCTACAGAACATTCTCAGAGATGTTGTGAAGAACTTGTTACCGCAGGGGCTATTGACAAGTTGCTGACGCTTATTCGCTCAGTGAGCCGAAGTATACCTGATCAGGAGGTTCTTAAGCATGCTCTGTCAACTCTCCGAAATCTAGCCCGCTACCCTCACCTACTTGAATTGCTGATCCAGAGCAACGGTTCTATACAGACAATCCTCTGGGAGTTACTGAGGAATAAGGAAGACAGTTACTTTATTGCTTCTGAACTTCTGATGAAGATATCTTCAACTCCTAAAGGTGTTGAATCGTTACGCAGCTTACCTGCTCTTGTAAAACGACTGAATGCTCTTGTTGAGGAGCTTAAACGGAAGGCAATCTACGAGAAAAGAAATGGCAGAACTCCTAGTGCAGTAATAAGAGAGAATAGAGAGAGGAGGTTGAAGGAGGCTGCTGGGATTCTCAAACTGATAACAAGTGCCTAA 4146 0.4219 MDGDEPPCASPYVSSSSIFKDISNFKTPKRPSYNLNFQSPGQKFFTASKQTPHSSAFRRWPYIAPPSSARTKKSAAAARKLKAFELEQSQSSRKAETKKEQSLKSLAKSITVWLNFLFENPATCGCNLSIAGIQMGDKHFEAEATKGKRDSGAGISIGVDKAWRTPKRQRKMWSRAQECVVNGNALTNCMFSNLRKSLEDVCSFDDLKQRMSVYLNSGSCKEIFEVMNQVTKNIDEGRLKLKPHCPIVTDLGLKNKATRILMSYNPIWLRLGLYLIFGGDSLVPDGDDDSEQQITFLKMVIEKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVLTLDRIKSQSCLSLKYGIDGLDGGSPLLFKADSWIKSSGQVISEFLSSEVMHGEGNLLAHLVIIGYKVSHQQGSLVEYDFKVRDLFVDLQDGLKLCRAIQLLQHDSSILTKIVVPSDTYKKNFANCGLALQYLKQAGVLLHDEDNMMIVAEDVANGDKELVLSLLWNMFVHLQLPLLVDKSSLLDEIGKIRGLGVDAITNANSSSLELLLNWIQAVCENYDCGIDNFDSLVDGKAIWCLLDYYFQKELPSSCLRKEVNTKSGQESIMSVNDYSDAVYNFILSQRLTKLLGNFPEVLQISDLLEYNGASSDRSVVILLVFLSRQLFVKKNMDQLNFHKLLGCDCQSLYRKHLKMEQCLSNSGAVQKPDASDVHDNEDAAKKFKAIQTWWQDMAERNQKSYMKLAACSPIESSANFRRETAAITIQSHFRRLVARRMFLKMNNAVSLLQTVFRAWLEVRQESSFTFVQGQNFSCAIHKRSETYRRYAMFFVQRLSFLKSKRSTLLIQQAVRSWLSWKHQRGCSILPYLTTSDPVAAAIIVQKFVRGWMARSRYNQMLDQQQKASYLYFQKAMFELQTEAAIRIQLAWKRHMFFKSTQRHFYAKIIQSNFRRWRLRRIYLNQIQAVLRIQCYFRVSMSVKAFQHLKMAFKAAIVIQSFMRAWIARKEAYARRSCIVSIQRHCRTWLARRDFMCQRGAAMKIQSVILSLKYQKALNYRKDAVLQIQRFIRGHLSRNRLLGGASRQRAMIPRGCILRSDGYIGFQLEIFLCSVLKLQRWWKCVLLHKLRTKSAIIIQSCTRGWIGRRIATVRRHRVVVIQSHWKGYLARKESKEQLRDLRLRVKKSARNVDDSKRLINRLLVALSELLQMKSLSGILHTCATLDVATEHSQRCCEELVTAGAIDKLLTLIRSVSRSIPDQEVLKHALSTLRNLARYPHLLELLIQSNGSIQTILWELLRNKEDSYFIASELLMKISSTPKGVESLRSLPALVKRLNALVEELKRKAIYEKRNGRTPSAVIRENRERRLKEAAGILKLITSA 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 1013 1042 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 1012 1034 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 760 782 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 875 897 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 989 1011 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 1128 1150 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 1151 1173 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 1058 1080 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 841 863 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 963 985 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 940 962 IPR000048 GO:0005515
Lele33g0365 1381 SMART iq_5 783 805 IPR000048 GO:0005515
Lele33g0365 1381 SUPERFAMILY Calponin-homology domain, CH-domain 323 600 IPR036872 -
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 761 789 IPR000048 GO:0005515
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 1129 1156 IPR000048 GO:0005515
Lele33g0365 1381 SMART arm_5 1230 1275 IPR000225 GO:0005515
Lele33g0365 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1118 1175 IPR027417 -
Lele33g0365 1381 SUPERFAMILY ARM repeat 1198 1340 IPR016024 -
Lele33g0365 1381 Coils Coil 1169 1189 - -
Lele33g0365 1381 Gene3D - 992 1038 - -
Lele33g0365 1381 Gene3D - 877 942 - -
Lele33g0365 1381 Gene3D - 760 807 - -
Lele33g0365 1381 Gene3D - 943 991 - -
Lele33g0365 1381 Gene3D - 1126 1177 - -
Lele33g0365 1381 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1241 1288 IPR000225 GO:0005515
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 992 1019 IPR000048 GO:0005515
Lele33g0365 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1079 IPR027417 -
Lele33g0365 1381 Pfam Armadillo/beta-catenin-like repeat 1231 1275 IPR000225 GO:0005515
Lele33g0365 1381 Gene3D - 412 518 IPR036872 -
Lele33g0365 1381 ProSiteProfiles Calponin homology (CH) domain profile. 406 518 IPR001715 GO:0005515
Lele33g0365 1381 Pfam Calponin homology (CH) domain 426 516 IPR001715 GO:0005515
Lele33g0365 1381 PANTHER UNCHARACTERIZED 39 863 - -
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 1059 1088 IPR000048 GO:0005515
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 1152 1180 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 992 1009 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 764 779 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 878 896 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 1130 1147 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 1014 1033 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 1155 1171 IPR000048 GO:0005515
Lele33g0365 1381 Pfam IQ calmodulin-binding motif 1061 1079 IPR000048 GO:0005515
Lele33g0365 1381 ProSiteProfiles IQ motif profile. 878 905 IPR000048 GO:0005515
Lele33g0365 1381 Gene3D - 544 673 IPR036872 -
Lele33g0365 1381 Gene3D - 1178 1380 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0365 Lele-ChrLele33 2299546 2308366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0365 1007 1187 Myosins gene family AT5G43900 27.807 6.23e-07 52.4