Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0359 ATGGATTGTTTCCCATGCTGCAATAAACAAGAACTTGAAACGGATCCTTTGAGCAAAAGTAACAAGGATCATGCACAATCCAGTAAATCCACGTTCAAATCTTTTTTGGGGGCTCTCGCTATCAAAACAGGTAGCAGCAGACACAGACACATTACAGCTGAGATACGAAAATATGGAACAGCGAAGAACAATTCCCGAGTTTTCACAGTTCAAGAACTCGCTTCTTCAACTGACAACTTCAGTAATGACTGTTTGATCGGTGAAGGTGGATTTGGCAGTGTCTACAAAGGATACATACAAAGTCTTAATCAAGCCGTGGCTGTGAAGAGACTGGACAGGAACAAAATGCAAGGAAGTAGAGAATTCTTTTCAGAAGTTGTAACGTTGAGTTTGGTGAAGCACCCCAACCTCATCAAGCTCATAGGTTATTGTATTGAAGGAGATCAAAGGATGTTAGTTTATGAATTGATGGTCAATGGCAGCCTCGAAAGTCACCTTCTAGATTTAGAAGCAGATAAGGAGGGATTGAATTGGGCAACGAGGATGAAAATAGCAGAAGGAGCAGCGAGAGGAATGGAAGTCTATGATACTGCTAGGGCAGAAGAAGAGCAAAACCTTATTGACTGGGCACAGCCAATGCTAGAGGACAGAGAGAAGTTCACACTAATGGCAGATCCATTGCTGAAGGATAACTTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCAGACACAAGGCCATTGATGAGTGATGTGGTAACAGCGCTTCAGCACATAACACAACCACCAGTAAATGGTGCAGAAGATGATGAAAATAACAACAACAAAGGACAATCTGTAAAAATTGCAGGCCATGTTCAATCATTTAGGGTTGGAAGCACACGTGTAGACAATCTACAACATCAAATAAAGCTTGGAAGTTCAAGTGTACAACATCAAAGACTTGGAAGTTCAAGTGTTGGAGGCCATCATCAACACCACAGGATTGGAAGTTCAATAGGCCATCAACAACATCACAGGCATGGAAGTTCAAGTGTTGGAGGCCATCAACAACATCACAGGCTTGGAAGTTCAAGTGTTGGTGGCCATCAACAGCATCACAGAGCTGGAAGTTCAACAAGTGTTGGAGGCCATCAACAACATCATAGGGCTGGAAGTTCAAGTGTTGGCCAATAA 1203 0.4306 MDCFPCCNKQELETDPLSKSNKDHAQSSKSTFKSFLGALAIKTGSSRHRHITAEIRKYGTAKNNSRVFTVQELASSTDNFSNDCLIGEGGFGSVYKGYIQSLNQAVAVKRLDRNKMQGSREFFSEVVTLSLVKHPNLIKLIGYCIEGDQRMLVYELMVNGSLESHLLDLEADKEGLNWATRMKIAEGAARGMEVYDTARAEEEQNLIDWAQPMLEDREKFTLMADPLLKDNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHITQPPVNGAEDDENNNNKGQSVKIAGHVQSFRVGSTRVDNLQHQIKLGSSSVQHQRLGSSSVGGHHQHHRIGSSIGHQQHHRHGSSSVGGHQQHHRLGSSSVGGHQQHHRAGSSTSVGGHQQHHRAGSSSVGQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0359 400 FunFam serine/threonine-protein kinase PBS1-like 46 156 - -
Lele33g0359 400 Gene3D Transferase(Phosphotransferase) domain 1 45 199 - -
Lele33g0359 400 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele33g0359 400 Pfam Protein tyrosine and serine/threonine kinase 85 193 IPR001245 GO:0004672|GO:0006468
Lele33g0359 400 ProSiteProfiles Protein kinase domain profile. 80 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0359 400 MobiDBLite consensus disorder prediction 314 400 - -
Lele33g0359 400 SUPERFAMILY Protein kinase-like (PK-like) 65 193 IPR011009 -
Lele33g0359 400 MobiDBLite consensus disorder prediction 345 400 - -
Lele33g0359 400 Gene3D Transferase(Phosphotransferase) domain 1 200 293 - -
Lele33g0359 400 PANTHER OS07G0668900 PROTEIN 3 193 - -
Lele33g0359 400 MobiDBLite consensus disorder prediction 314 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0359 Lele-ChrLele33 2272524 2276112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0359 191 272 Glycoside Hydrolase AT3G07070 56.098 6.95e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele33g0359 PK_Tyr_Ser-Thr 3.5e-19 CL0016