Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0345 ATGGATTCCACTATCATTTGTGGAAGTTTGAATCCCGTTGATGGAACACCCACCTTCAGAACTGCCTGCCACCGTCGCTGCAGTTGGGGATGGATTCATAGCCCAAGACATATGGTTTCAGAACATAGCAGGTCCTCAGATCAGAAGCACCAGGCGGTGGCTCTCCTGGACGGTGCCGATCTCTCCGTCATCAACCGCTGCCGTGTGGACGCCTTCCAAGACAGTCTATACACCCACACCAACAGGCAACTCTATCGTGACTCCTTCATCACAGGCACCGTCGACTTCCTCTTCGGTAATGCCGCCGTCGTGTTCCAAAAGTGCAACCTCGTGGCCCGAAAGCCCATGAATAACCAGAACAACATGGTCACAGCTCAAGAACGCGAAGATCCAAACCAGAACACTGGGACTTCAATCCAGCAATGTAACCTAACACCAAGCTCTGATCTGAAGCCCGTGGTGGGTACAGTGAAAACCTTCTTGGGTCGTCCATGGAAGGAATTCTCTCGAACTGTGGTGATGCAGTCATCTCTGCATAGCCACATTGATCCAATAGGATGGGCTCCATGGGACACTAAGCAATCGACACTGGAGAATTTGTATTTATCGAGAATATCAGAACAGATGACCTGGTGCTGGTACGGCGAGGAGAGTGAAATGGCCCTGCTATCATGTGATTACAAGTGCTGCGGAGGCAAGCAAATTCACGGTGGCTCAGCTCATTCAAGGGAAAAGGCATTATTGCTTGGCCATTATAGGATTTACAGGAAGGAGGTAAAGGGTCGCGATTTGCAGAAGCATGGCGAAGAAGATAAAAGGGATCTACAAAAGTTTCAAATTCATTTCCCAGATATTTGTGGTACTGAGAAACACATCATTTATGTTGATCAAGTTGTGAAGGATCGGGAGATGGAAATCGGGTACCCTACAGACGTTAAACATGTGGCTCACATCGGCTGGGATCATAGCCCCTCCATCACTGCACCAAGTTGGATGAATGAATTTAGGACATCGCCTAATTTGGCAACGCACTTTGGCAGCACGGGGGAAACAACAGTTACCACATGGTCCAACCAAGTAGATACGGACGATACCATAAGAGGCAAAACGACATCAATCAAGGGCTCATCTTCGGACAATCATGGTAAAGCTTCTAAAAAGAACAAGAGCAGAAAACCAAGTCAACCTCTTCTCCTAGGTCGTCGTCTTCTTCATCTTCGTCCTCAACAAGACGATCAAAAGCTCCCAAGTCAAAGCTTACGTTTTCTGAAGCAACACCAACAATACAAATCTAGACGCCAAAATTAG 1308 0.4763 MDSTIICGSLNPVDGTPTFRTACHRRCSWGWIHSPRHMVSEHSRSSDQKHQAVALLDGADLSVINRCRVDAFQDSLYTHTNRQLYRDSFITGTVDFLFGNAAVVFQKCNLVARKPMNNQNNMVTAQEREDPNQNTGTSIQQCNLTPSSDLKPVVGTVKTFLGRPWKEFSRTVVMQSSLHSHIDPIGWAPWDTKQSTLENLYLSRISEQMTWCWYGEESEMALLSCDYKCCGGKQIHGGSAHSREKALLLGHYRIYRKEVKGRDLQKHGEEDKRDLQKFQIHFPDICGTEKHIIYVDQVVKDREMEIGYPTDVKHVAHIGWDHSPSITAPSWMNEFRTSPNLATHFGSTGETTVTTWSNQVDTDDTIRGKTTSIKGSSSDNHGKASKKNKSRKPSQPLLLGRRLLHLRPQQDDQKLPSQSLRFLKQHQQYKSRRQN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0345 435 PANTHER PECTINESTERASE 1 203 - -
Lele33g0345 435 Pfam P21-Rho-binding domain 305 336 IPR000095 -
Lele33g0345 435 MobiDBLite consensus disorder prediction 359 435 - -
Lele33g0345 435 ProSiteProfiles CRIB domain profile. 306 319 IPR000095 -
Lele33g0345 435 SUPERFAMILY Pectin lyase-like 2 203 IPR011050 -
Lele33g0345 435 Pfam Pectinesterase 2 203 IPR000070 GO:0030599|GO:0042545
Lele33g0345 435 Gene3D - 1 220 IPR012334 -
Lele33g0345 435 Gene3D CRIB domain 300 349 IPR036936 -
Lele33g0345 435 SMART PBD_5 306 338 IPR000095 -
Lele33g0345 435 CDD CRIB 304 338 - -
Lele33g0345 435 MobiDBLite consensus disorder prediction 411 425 - -
Lele33g0345 435 MobiDBLite consensus disorder prediction 359 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0345 Lele-ChrLele33 2142204 2148670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0345 2 201 Carbohydrate Esterase AT1G11580 59.500 2.46e-75 244