Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0338 ATGATTATTTATACCAAGCCTGTAAGTAGTTCATCTTACTTTCCCTCTTGCTTCTTCATAAACTCTGTTATCCCAATGGCTGCTTCCGAACATTCTTCCACTGATGAAGTCTTGGAGAACCTTCAAGAGGAAACCAGCAAAGAATCAAAGCCAGAATTTTCCAGAGATGAGGAATCGTTGATTATCAGAATGTATAATCTAGTTGGTGAAAGGTGGGCTTTAATAGCTGGGAGGATCCCTGGAAGAACAGCTGAAGAGATCGAAAAGTACTGGACTGCTACATATTCAACAAGGGATTGA 300 0.4033 MIIYTKPVSSSSYFPSCFFINSVIPMAASEHSSTDEVLENLQEETSKESKPEFSRDEESLIIRMYNLVGERWALIAGRIPGRTAEEIEKYWTATYSTRD 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0338 99 CDD SANT 52 91 IPR001005 -
Lele33g0338 99 Pfam Myb-like DNA-binding domain 51 91 IPR001005 -
Lele33g0338 99 FunFam MYB-like transcription factor 52 94 - -
Lele33g0338 99 SUPERFAMILY Homeodomain-like 50 95 IPR009057 -
Lele33g0338 99 SMART sant 49 97 IPR001005 -
Lele33g0338 99 Gene3D - 52 94 - -
Lele33g0338 99 ProSiteProfiles Myb-like domain profile. 45 95 IPR001005 -
Lele33g0338 99 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 99 IPR017930 -
Lele33g0338 99 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 51 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0338 Lele-ChrLele33 2116579 2117176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0338 50 98 MYB Transcription Factor Family AT5G35550 53.061 7.76e-15 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele33g0338 Myb_DNA-binding 4.2e-08 CL0123