Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0331 ATGAAACGGCATTCACATCATAACAAAATGAGTCGCTTCATGAATTCTCCGAAACTGTTCCTTCTTCTTTGCCTTATGATCCTTTCCGACGAAGGACAAAGTGACTACCCTTGTTCGAGCACAACATATGCCCAGAACAGCACATTTCAGGCAAATCTTAATCGCTTAGTTTCTTCCCTCTCCTCCAACGCCAATCACAGTGATGGTGTTTACAACACCACCGTCCTCGGGCAAGGGAACAACTCCAACGCCACCGTCTACGGCCGCCTCCAGTGCCTACGTGATGCCACCGTCCAGAGTTGTCAAAAATGTGTTTCCGACGGAATCAATGATATGCTTCAGAAATGCCCCAATAATACAGGAGCCGTCGGTTGGTACGACCAGTGCTATTTACGTTACTCCGACGAGTATTTCTTCAACAAAATGGAAGAAGACCCCAGGATAATTGCTGTTAACACCGGCAAAGCAACAGACACGACTAGATTTATGAACCTGTTGGGTGAAACCTTGAGAGTGGTTACGGAAGAGGCGTCGAAAGGCGGAAGCAAGAAATTTGCGACGAAAACAGTAGACTATGATGCTTTCCAAACTCTACATACTATGGCGCAGTGCACATCGGATATATCTGAGATTGATTGTCTCTACTGTCTCCGTAACAGTGTTAGCAATTTGCCTAGTTGCTGCAATGGAAATGTAGGCGGAGCAACCGCCAAGCCCAGTTGCTTTTTAAGGTATGAAACGTATCCCTTCTACCAGGAAGCCCCTCCGCCACCAGCTCCTTCGCCGGAATCCACTTCCCAAGGTCCGGAATCCACTTCCAAAGATAAAAGCAGGATTTCAGCTGGAATAGCTATTGCCATAGCTGTTCCAACAGTGATATTCATATTGCTAGTCTTGCTCTGCTTCTTGTGCTTAAAAAGGAGAGGAAGGAAATATGCTTCAGTTCCTAAACAAACTGTTGATATTTCAAGTGTAGAATCCCTACAATTTGATTTGGACACCATCAAATCAGCCACAAACGACTTCTCTCCTGACAATAAACTTGGTCAGGGAGGATTTGGTGAGGTTTACAAGGGTGTTCTGCCTGGAGGGCAAGAGTTAGCTGTAAAGAGATTATCAAGTAGTTCAAAACAAGGTGCAGGAGAATTTAAGAACGAAGTTGCTACCATGGCAAAACTTCAACACAGAAATCTTGTAAGGTTACTTGGATTTTGTCTGGACGAAGGAGAAAAGATACTGGTTTATGAATTTTTGCCCAACAAAAGCTTGGATAATTTTTTGTTCGGACTCGAGAACCAAGGTAAGTTGAATTGGTCAAAGCGATACAAGATCATTGAAGGCATTGCGAGGGGAATGCTTTATCTTCATGAAGATTCCCGATTAAAAATTATACATCGCGATCTCAAAGCTAGTAATGTGTTGTTGGATGAAGATTTGAATCCAAAAATCTCTGATTTTGGAACGGCTAGAATTTTCGGAGTTGATCAGACACAAGTAAGCACAAGTAGAGTTGTCGGCACCTTTGGGTACATGGCTCCAGAATATGCAATGCATGGTCACATTTCAATCAAATCAGATATATATAGTTTTGGTGTCCTAACTTTGGAGATAATTAGTGGCCAGAAAAATACATCATTCTATGGATCAAGTTACGCTGAAGATCTACTAAGCCATGCCTGGAAGCTGTGGAGGGGAGGGACGCCATTGGAATTGATGGATCCTAGCTTAAGAGAGTCTTGTTCAAGAAATGAAGTGATTAAATGCATTCATATGAGCTTGTTGTGTATTCAAGAAAACCCAGCTCTAAGACCCACGGTACAATCTATTATGGTGATGCTAAGTAGTGAATCCGTCACAATGTCAGCTCCTCGAAAGCCAGCATTCTTTATTGGTCGCCATAGAACAGATTCAAACAATGCAGCCATTTCTGAGAATAGCACGGACCAATCGACAAGCAAGTCTATGCAATACTCTGTGGATGAAGATCCAATTTCTGACTTGTATCCTCGCTAA 2013 0.4297 MKRHSHHNKMSRFMNSPKLFLLLCLMILSDEGQSDYPCSSTTYAQNSTFQANLNRLVSSLSSNANHSDGVYNTTVLGQGNNSNATVYGRLQCLRDATVQSCQKCVSDGINDMLQKCPNNTGAVGWYDQCYLRYSDEYFFNKMEEDPRIIAVNTGKATDTTRFMNLLGETLRVVTEEASKGGSKKFATKTVDYDAFQTLHTMAQCTSDISEIDCLYCLRNSVSNLPSCCNGNVGGATAKPSCFLRYETYPFYQEAPPPPAPSPESTSQGPESTSKDKSRISAGIAIAIAVPTVIFILLVLLCFLCLKRRGRKYASVPKQTVDISSVESLQFDLDTIKSATNDFSPDNKLGQGGFGEVYKGVLPGGQELAVKRLSSSSKQGAGEFKNEVATMAKLQHRNLVRLLGFCLDEGEKILVYEFLPNKSLDNFLFGLENQGKLNWSKRYKIIEGIARGMLYLHEDSRLKIIHRDLKASNVLLDEDLNPKISDFGTARIFGVDQTQVSTSRVVGTFGYMAPEYAMHGHISIKSDIYSFGVLTLEIISGQKNTSFYGSSYAEDLLSHAWKLWRGGTPLELMDPSLRESCSRNEVIKCIHMSLLCIQENPALRPTVQSIMVMLSSESVTMSAPRKPAFFIGRHRTDSNNAAISENSTDQSTSKSMQYSVDEDPISDLYPR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0331 670 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Lele33g0331 670 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Lele33g0331 670 MobiDBLite consensus disorder prediction 639 670 - -
Lele33g0331 670 FunFam cysteine-rich receptor-like protein kinase 10 418 620 - -
Lele33g0331 670 Pfam Salt stress response/antifungal 38 135 IPR002902 -
Lele33g0331 670 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Lele33g0331 670 Gene3D Phosphorylase Kinase; domain 1 306 417 - -
Lele33g0331 670 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Lele33g0331 670 MobiDBLite consensus disorder prediction 253 275 - -
Lele33g0331 670 FunFam Cysteine-rich receptor-like protein kinase 25 146 250 - -
Lele33g0331 670 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Lele33g0331 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lele33g0331 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 655 - -
Lele33g0331 670 FunFam Cysteine-rich receptor-like protein kinase 10 306 417 - -
Lele33g0331 670 Gene3D - 33 138 IPR038408 -
Lele33g0331 670 Gene3D - 147 250 IPR038408 -
Lele33g0331 670 Pfam Protein tyrosine and serine/threonine kinase 345 611 IPR001245 GO:0004672|GO:0006468
Lele33g0331 670 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Lele33g0331 670 SMART serkin_6 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0331 670 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0331 670 CDD STKc_IRAK 348 613 - -
Lele33g0331 670 MobiDBLite consensus disorder prediction 639 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0331 Lele-ChrLele33 2054342 2057428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0331 13 670 Receptor kinase-like Gene Family AT4G05200 47.230 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0331 PK_Tyr_Ser-Thr 2.7e-47 CL0016