Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0330 ATGAAGCTCTTCAAGATTGATCCTCCTCTCTCTGTTCTCATGATCTTCAACACGATCTTTGCAGTGATAATAACCAGTCCGAGAGCATCAGCCCAAACTGAGGAATATCATTTCTGTCAAAACACCACATTTTTCTCTTCCAATACTGCCTATCAAACCAATCTCAACCATCTCCTTTCCTCACTTTCCACAAATTCCACCCGCCAAAACGGTTTCTACCATGCCACCGCCGGCAACTCCAACGACACTGTCTACGGCGCCTTCCTCTGCCGCGGAGATCTCAACACCGATGCCTGCCATGACTGCGCTTCCACAGCAGCCAAACAAATACTCCAAAAGTGTCCGTTCGACAAAAAGTCGGTTCTCTGGTTCAATGAGTGTATGTTGCGTTACTCCGACGAGCCTTTCATCTCCACCAGTGAAGAAACGCCCAGGCTTGTTTTGATGAATACTGCGACTAGCTCAAACCAGAGTAGCTTTATGTCGCTGTTGGCTGAGACTATCAACGCGGCGGCGGAGCAGGCGGTGAAGGGCGGAGCCGACAAGAAATTTGGTACCAAAGAAGCCAAATTTTCTAGTTTTCAAACGCTTTACACGCTTGCACAGTGCACGCCGGACTTATCAGAAACTACCTGCGACACATGCTTGAAACGAGCAATTTCCAACTTACCCAGTTGCTGCAATGGAAAGATTGGGGCCAGAGTACTACAAAGTAGTTGTATTGTCCGATATGAAACGTACCCATTTTACAATCCATCGTCGGTGATTGCCTCACCAGAACCAACGCCAAAAGGAAAAACCCGGATCTCTGTAGCCATAATCGTTGCGATTGTGGCTCCAATTGTGACTGTGTTGCTGCTTCTCTTCCTTCTCTGCTGGTCATTAACTAGAAGGGCAAGCAACAAGAAGCACATATCAGTGCCAACTGAAGAAAATGATTTTGAAATTTCCGGTGAGGAGTACTTGCAGTTTGATCTGGAAACAGTCAAATTGGCCACAAACAACTTCTGCCATGACAATAAATTAGGCGAAGGAGGATTTGGTGAGGTTTTCAAGGGATCTCTTCCTAATGGGCAAGCTATTGCAGTGAAGAGGCTTTCATTAAGCTCTACGCAAGGGGTAGAAGAATTCAAGAATGAGGTGGTTTTACTGCCCAAGCTTCAACATAGAAACCTTGTTAGACTATTGGGATTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATCCCCAACATGAGCTTGGACCATTTTCTTTTCAACGATGAAAGAAAAAGCATGCTGAGTTGGCCAAAACGGTATAAGATTATAAAAGGAATTGCTCGAGGAATACTTTATCTTCATGAAGACTCTCGTTTTAGAATCATACACTGTGATCTTAAAGCAAGTAATATATTATTAGATGAAGATTTTAATCCAAAAATTGCAGATTTCGGTATGGCAAAATTTTTTTATGCTGATCAAACTCAAGGAAATACAAGTAGAATCGTTGGAACATTTGGTTATATGCCTCCAGAATATGCAATGCATGGACATTTATCTATAAAAGTGGATGTATATAGCTTTGGCGTGTTGATTTTGGAAATAATCAGCGGACAAAAGAGCACCTCCTTTCAAGAATCCAACTACGATGAACATCTCTTGAACTCTTCATGGAGAAAATGGAAAGATGGGAGGCCATTGGAAGTGTTAGACGTGAGTTTGAGAGATTCTTGTGATAGAGAGGAAGTGAACAGATGCATTCAGATTGCATTATCATGTGTACAAGAAGATCCAGATCGAAGGCCAACAGTGCAAACAATAGTTCTGACGCTCAACAGTTACTCAGTTAGTGTAGCAATACCTGAGAGGCCTCCAATGTTGGTTCAAAGCAGAACTGTTGTTGAGCCCTGCAGCCTTCCATTGGAATCATCAGATAAGTCTTCTAAAAGCAAATCATCAGTCTCATACTCTGTTAATGAATCTTCCATCACTCAAGTGTACCCTCGCTAG 1998 0.4289 MKLFKIDPPLSVLMIFNTIFAVIITSPRASAQTEEYHFCQNTTFFSSNTAYQTNLNHLLSSLSTNSTRQNGFYHATAGNSNDTVYGAFLCRGDLNTDACHDCASTAAKQILQKCPFDKKSVLWFNECMLRYSDEPFISTSEETPRLVLMNTATSSNQSSFMSLLAETINAAAEQAVKGGADKKFGTKEAKFSSFQTLYTLAQCTPDLSETTCDTCLKRAISNLPSCCNGKIGARVLQSSCIVRYETYPFYNPSSVIASPEPTPKGKTRISVAIIVAIVAPIVTVLLLLFLLCWSLTRRASNKKHISVPTEENDFEISGEEYLQFDLETVKLATNNFCHDNKLGEGGFGEVFKGSLPNGQAIAVKRLSLSSTQGVEEFKNEVVLLPKLQHRNLVRLLGFCLDGEEKILIYEFIPNMSLDHFLFNDERKSMLSWPKRYKIIKGIARGILYLHEDSRFRIIHCDLKASNILLDEDFNPKIADFGMAKFFYADQTQGNTSRIVGTFGYMPPEYAMHGHLSIKVDVYSFGVLILEIISGQKSTSFQESNYDEHLLNSSWRKWKDGRPLEVLDVSLRDSCDREEVNRCIQIALSCVQEDPDRRPTVQTIVLTLNSYSVSVAIPERPPMLVQSRTVVEPCSLPLESSDKSSKSKSSVSYSVNESSITQVYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0330 665 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Lele33g0330 665 FunFam Cysteine-rich receptor-like protein kinase 25 144 249 - -
Lele33g0330 665 CDD STKc_IRAK 342 608 - -
Lele33g0330 665 Gene3D - 32 136 IPR038408 -
Lele33g0330 665 Gene3D - 145 249 IPR038408 -
Lele33g0330 665 SUPERFAMILY Protein kinase-like (PK-like) 321 630 IPR011009 -
Lele33g0330 665 ProSiteProfiles Protein kinase domain profile. 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0330 665 Gene3D Transferase(Phosphotransferase) domain 1 412 616 - -
Lele33g0330 665 MobiDBLite consensus disorder prediction 637 665 - -
Lele33g0330 665 Gene3D Phosphorylase Kinase; domain 1 296 411 - -
Lele33g0330 665 Pfam Protein tyrosine and serine/threonine kinase 339 606 IPR001245 GO:0004672|GO:0006468
Lele33g0330 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 661 - -
Lele33g0330 665 MobiDBLite consensus disorder prediction 635 665 - -
Lele33g0330 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Lele33g0330 665 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Lele33g0330 665 SMART serkin_6 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0330 665 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 136 - -
Lele33g0330 665 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Lele33g0330 665 FunFam cysteine-rich receptor-like protein kinase 10 412 614 - -
Lele33g0330 665 FunFam Cysteine-rich receptor-like protein kinase 10 297 411 - -
Lele33g0330 665 Pfam Salt stress response/antifungal 154 247 IPR002902 -
Lele33g0330 665 Pfam Salt stress response/antifungal 39 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0330 Lele-ChrLele33 2045343 2047997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0330 18 665 Receptor kinase-like Gene Family AT4G05200 48.879 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0330 Pkinase 1.4e-46 CL0016