Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0328 ATGACCTTCAAGATCATAATTTTCTCACTCTTCTTCATCGGCTTTCTCAATTCTTCTTCTTCTCAAGTCGTCGGTCGTAATGATCTTTACCCTCAATGCTCTACCGACAGCAATTTCACTGCCAATAGTACCTTTGACTCTAACCTCAACACCCTCTTTTCTGCCCTAACTTCCAACGAAACCGCCAATCTCGACTTCTACAACACCACCGTCTCCCGCGGTGGAGATACCGTATACGGCCTCTTCATGTGCCTGGGTAGCGTCAACCTAGACATATGCCGCCAGTGCGTCGGTAACTCAACGATACAGTTAGGTGACACATGCCGATTTTCGAAGAAGGCCTCAAACTGGCGCAACGAGTGCTTGGTTCGCTATTCCGACCGCAACTTCTTCTCCACCTTCGATACAAGGCCTAGACTTCGCATGTTGAACCCTAACAATGTCTCCAACCAGGCAGGATTCATGAATGTATTGAGGACTGTTATGAACCTGACGGCATATGAGGCGGCCAAGCCTGCTCCGATGAAGAAGAAGTTTGGGACCAATGCGGCGACGGTGGAGTTTCAAATTCTGTATGTTCTGGTTCAGTGCACGCCGGACCTTTCGTCGGCGGATTGCAGAAGCTGTCTGAGTGGCGTGATTGAGGACTTTACATGGTGTTGTGATGGGAAGATCGGAGGAAGAGTTTATTATCCAAGTTGCCTCGCTCATTATGAACTGTATCCGATCTCTAATTCTTCTCAGCCTGTTCGGCCGATAACGCTGCCGCCTCCTCCTCCGGCTCTACTTTCTCCTCCAACAGATGAATCAAATAAAGAAGATACGTATGGCTTTTCTCATGCAAAAATACTTGGGTATATGTCTCCAGAATATGCAATGTTTGGACACTATTCTGAAAAATCAGATATTTTTAGCTTTGGAATAATAGTATTAGAAATGATAAGTGGAAAGAAGATTACAAGTTTTGATCAATCTCATGGCCTCCTAAACTATGCTTGGAGTCATTGGAAGGAAGAAAAGATGTTGGAGATATTGGATTCAAATCTAGATGAATCTGAATCGTTTAACGAAGTGAACAAGTGCATCCAAATTGGGTTGTTATGTGTTCAAGAAAATCCAGAAGTAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATAATTCAATCCAATTGCCACTTCCACAAGAGCCTGCGTCCTTTCTGGAGGGCCAAATGGAGCTTAATACAGAAAGCAAAGAATCTGTGAATGAAATGTCTATCACTGAATTCTTTCCTCGGTAG 1287 0.4421 MTFKIIIFSLFFIGFLNSSSSQVVGRNDLYPQCSTDSNFTANSTFDSNLNTLFSALTSNETANLDFYNTTVSRGGDTVYGLFMCLGSVNLDICRQCVGNSTIQLGDTCRFSKKASNWRNECLVRYSDRNFFSTFDTRPRLRMLNPNNVSNQAGFMNVLRTVMNLTAYEAAKPAPMKKKFGTNAATVEFQILYVLVQCTPDLSSADCRSCLSGVIEDFTWCCDGKIGGRVYYPSCLAHYELYPISNSSQPVRPITLPPPPPALLSPPTDESNKEDTYGFSHAKILGYMSPEYAMFGHYSEKSDIFSFGIIVLEMISGKKITSFDQSHGLLNYAWSHWKEEKMLEILDSNLDESESFNEVNKCIQIGLLCVQENPEVRPSMATVVSYLSNNSIQLPLPQEPASFLEGQMELNTESKESVNEMSITEFFPR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0328 428 Pfam Protein tyrosine and serine/threonine kinase 284 386 IPR001245 GO:0004672|GO:0006468
Lele33g0328 428 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Lele33g0328 428 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Lele33g0328 428 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Lele33g0328 428 Gene3D - 27 130 IPR038408 -
Lele33g0328 428 Gene3D - 138 242 IPR038408 -
Lele33g0328 428 SUPERFAMILY Protein kinase-like (PK-like) 284 406 IPR011009 -
Lele33g0328 428 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
Lele33g0328 428 Gene3D Transferase(Phosphotransferase) domain 1 262 394 - -
Lele33g0328 428 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 12 250 - -
Lele33g0328 428 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 130 - -
Lele33g0328 428 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0328 Lele-ChrLele33 2030075 2033634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0328 281 428 Receptor kinase-like Gene Family AT4G23220 40.000 1.02e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0328 PK_Tyr_Ser-Thr 4.4e-10 CL0016