Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0326 ATGGAACATTCAAGCAAAGCTTCTCAATCTTCCATCAGAACTGAAACTGAACTTGCAATTGAAATACACAATAAAAATCGATCGGACACCACCAACACAATATTCATCCTTACCATGACGTCCATGGTCATGGCTTCCCTCCAAACTTTCTTGCTCTTCTTTATTACCTTCTTGTGTTCTGCTACTACTGAAGCTCAGCCTACTTATCTTTACCACAACTGCTCTTCCAACAAAACCTTCGCTCCCAATAGTGCCTTCCAATCTGACCGGACCAGACTCCTCTCTTCCTTAGCTTCCGCCAACACCGACTTCTACAACGCCACCGTTGCCAGTGCTGGTGACACAGTCTACGGCCTCTTCATGTGCCGGGGTGACCTCAACCTCACGGTGTGCCACCAATGCGTCGTTAACGCAACCCAACGATTGCCTTCCGAGTGCAGGGTGTCGAAGGAGGCAATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTCGTTCTTCTCCACCTTCGACACAAGGCCTAGAGTCGGCATCTTGAACACAGGCAACGCTTCCCTGCCCAGCTTCTTACAGTTATTGTTGGACACACTTAACTTTACTGCAGATGATGCAGCTAACAACTCTAAGAAATATGCGACAAGGGAAGCAAGCATATCTGGGTTCGGAACTATGTATTCTCTACTACAGTGTACGCAGGACCTATCATCCCAAGATTGCAGAAAATGTCTGAGTGCTGCGATTGGAGACCTTTCATGGTGCTGTGTGGGAAAACGAGGAGGAAGAGTTCTATATCCCAGCTGCAACGTTCGCTATGAGACCCATCCTTTCTATATTTCTGATGATCTGCCGCCAGAAGCGACGAAGCCTACACCGGCTTCACTCTCTCCTCCAACAAATTCATCAGATCCTCAAGTAAAAGGAAAAGGTCAGTCAACGAGGACTACTGTGATAGTTGTGGTTTCTTCTGTTGCTGGTTTGGGAATATTATTTTGTCTGGCCTACTATCTCTTAAAGAATCTAATAAAGAAGAGACGCAACGCTGTTCTCAGACATAGATACTTTGGAAATGAAAGCAACAATTTAGAGGCTCTGCAATTTAGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTCGCATGAAAATTGTTTAGGCCAAGGTGGATTTGGACAAGTTTTCAAGGGTATTCTTCCGAATGGTCAAGAAATAGCTGTCAAGAGACTTTCAAAAAGTTCTGGTCAAGGTGGAGAAGAATTCAAGAACGAGGTCTTATTGATTGCCAAACTTCAGCACAGAAATTTGGTAGCCTTGCTAGGATTTTGCATAGAAGAACAAGAGAAAATTCTTATTTATGAATATGTTCCGAACAAAAGCCTTGACTACTTTGTATTCGGTTCCCAAAAAGGCAGAGTCTTAAATTGGGTAGAGCGCTGTATCATCATCAGAGGAGTTGCTCGAGGAATTATTTATCTCCATGAATATTCTCGCCTTAAAGTTATACATCGTGATCTCAAACCAAGCAATATTTTATTAGATAATGAAATGAATCCAAAAATTTCAGATTTTGGCTTAGCTAAAATGGTTGCTATCAATACAAATGAGGGAAGCACCAATAGAATAGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGTACGGCCAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAATTTTAGAAATTATCAGTGGAAAGAAAAATACAAGTGGTCATAGTCAATCACAATATGCTGATGGCCTACTGAGCTCTGCTTGGAAGCAATGGAAGGAGGAAAAGTTGTTGGAGATATTAGATTTAAATATAAAAGAATTTGGATCATATAATGAAGTGGTCAAATGCATCCAGATTGGTTTGTTATGTGTGCAAGAAAATCCAGATTCAAGACCAACAATGGTTGAGGTTGTTTCATATCTGAATAATGATTCCATTCAACTGCCATTGCCACAGGAACCTGCTTTCTTTCTACACGGTGGAATGGGGCCTAGTAGTGGCACAAGTGGAATTAAGGAATCTGCAGGCTCCACTATTGAAGTGTCAATGAGTGAATTCTTTCCTCGTTAG 2103 0.4161 MEHSSKASQSSIRTETELAIEIHNKNRSDTTNTIFILTMTSMVMASLQTFLLFFITFLCSATTEAQPTYLYHNCSSNKTFAPNSAFQSDRTRLLSSLASANTDFYNATVASAGDTVYGLFMCRGDLNLTVCHQCVVNATQRLPSECRVSKEAIIWYDECLLRYSNRSFFSTFDTRPRVGILNTGNASLPSFLQLLLDTLNFTADDAANNSKKYATREASISGFGTMYSLLQCTQDLSSQDCRKCLSAAIGDLSWCCVGKRGGRVLYPSCNVRYETHPFYISDDLPPEATKPTPASLSPPTNSSDPQVKGKGQSTRTTVIVVVSSVAGLGILFCLAYYLLKNLIKKRRNAVLRHRYFGNESNNLEALQFSLATIEAATNKFSHENCLGQGGFGQVFKGILPNGQEIAVKRLSKSSGQGGEEFKNEVLLIAKLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDYFVFGSQKGRVLNWVERCIIIRGVARGIIYLHEYSRLKVIHRDLKPSNILLDNEMNPKISDFGLAKMVAINTNEGSTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIILEIISGKKNTSGHSQSQYADGLLSSAWKQWKEEKLLEILDLNIKEFGSYNEVVKCIQIGLLCVQENPDSRPTMVEVVSYLNNDSIQLPLPQEPAFFLHGGMGPSSGTSGIKESAGSTIEVSMSEFFPR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0326 700 SUPERFAMILY Protein kinase-like (PK-like) 364 669 IPR011009 -
Lele33g0326 700 Pfam Protein kinase domain 382 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0326 700 Gene3D Transferase(Phosphotransferase) domain 1 456 659 - -
Lele33g0326 700 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 343 455 - -
Lele33g0326 700 MobiDBLite consensus disorder prediction 294 310 - -
Lele33g0326 700 MobiDBLite consensus disorder prediction 284 310 - -
Lele33g0326 700 ProSiteProfiles Protein kinase domain profile. 380 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0326 700 Gene3D Phosphorylase Kinase; domain 1 342 455 - -
Lele33g0326 700 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 61 678 - -
Lele33g0326 700 SMART serkin_6 380 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0326 700 CDD STKc_IRAK 386 654 - -
Lele33g0326 700 ProSiteProfiles Gnk2-homologous domain profile. 173 278 IPR002902 -
Lele33g0326 700 ProSiteProfiles Gnk2-homologous domain profile. 68 168 IPR002902 -
Lele33g0326 700 Gene3D - 179 278 IPR038408 -
Lele33g0326 700 Gene3D - 66 168 IPR038408 -
Lele33g0326 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Lele33g0326 700 FunFam cysteine-rich receptor-like protein kinase 10 456 659 - -
Lele33g0326 700 FunFam Cysteine-rich receptor-like protein kinase 25 176 278 - -
Lele33g0326 700 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 67 167 - -
Lele33g0326 700 Pfam Salt stress response/antifungal 192 275 IPR002902 -
Lele33g0326 700 Pfam Salt stress response/antifungal 74 165 IPR002902 -
Lele33g0326 700 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0326 Lele-ChrLele33 2002833 2005982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0326 39 688 Receptor kinase-like Gene Family AT4G05200 44.874 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0326 Pkinase 2.4e-49 CL0016