Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0319 ATGACTACTTTCCTGGTCATGGTTTCCCTCCAAACTTTCTTACTCTTCTTCTTTATTACCTTCTTGTGTTCTGCTACTACTGAAGCTGAGCCTACTTATCTTTACCACAACTGCTCTTCCAACAAAACCTTCGCTGCCAATAGTGCCTTCCAATCGGACCGGACCAGACTCCTCTCTTCCTTAGCTTCCGCCAACACCACCGACACCGACTTCTACAACTCCACCGTTTCCGGTGCCGGTGACACAGTCTACGGCCTCTTCATGTGCCGGGGTGACGTCAGCCTCACGGCGTGCCACCAATGCGTCGTTAACGCAACCCAACGACTAGCTACCGAGTGCAGAGTGTCGAAGGAGGCAATAATCTGGTATGACGAGTGCTTGCTTCGCTATTCTAACCATTCCTTCTTCTCGACCGTCGACACAAGGCCTAGAGTCGGCCTCTTGAACACCGGAAACGTCTCAAACCCGGCAAGCTTCATGAGAACATTGTACGATATTATGAACAAGACCGCAGATGAGGCGGCTAAACCTGCTGTGGGGAAAAAGAAGTATAAGACCGGAACTGCGAATTTTTCAGCTTTACAAACTGTGTATACTCTTGCTCAGTGCACGCCGGACCTTTCGCCATCAGATTGCAGAAGGTGCCTGAGCGGTGTGATTGGGGACCTGGATTGGTGTTGTGATGGGAAGCAAGGGGGAAGGGTTCTGTACCCTAGTTGTAATGTTCGCTATGAATTGTACCCTTTCTATCTATCAGAAGCTCCGGCACCAACTCCGACACCGGCAATTGTTCCTGCCACAAATACTACTGGTTCCCAAGGAAAAAGTGGGATCTCATCGGGGACGATTGTTGCGATTGTGGTTCCAATTTCTGTTGCTGTACTGATATTTATAGTCGGCATTTGCTGCTTGAGTAAGAGAATGAGGAAGAAGCATTACTCTGTTCCTGAAGGAAAATCTGCAAGTGACATCAGCAACGCGGATTCACTGCAATATGATTTCAGTACAATTGAAGCAGCCACTAACAAGTTCTCTGAAGATAACAAGCTTGGTGAAGGCGGATTTGGAGCGGTTTACAAGGGGACGCTTGCAAATGGACATGAAATTGCTGTGAAGAGACTCTCACGAGGCTCTGGACAAGAGAAGATACTTGTTTATGAATATGTTCCCAACAAAAGTCTTGATTACATTCTTTTTGACCCTGAAAAGCAAAGACAGTTAGATTGGACAAAACGTTACAAGATTATCAAAGGAGTTGCTCGAGGCATTCAATATCTTCATGAAGATTCAAGGCCTAGAATTATACATCGTGATCTCAAAGCTAGTAATGTATTGTTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGGAATGGCAAGAATTTTTATGGTCGACCAGACTCAAGGAAATACCAGTCGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGCACGGCGAGTTTTCTGTTAAGTCTGATGTGTACAGCTTCGGTGTGCTTCTAATAGAGATTATAAGTGGGAAGAAGAATAGTTCATTCTATCAAATGGAGGGTGCTGAGGACCTGCTGAGTTATGCATGGAATCTTTGGAAGCATGGAGACCCCTTGGAACTGTTGGACCCCACAATAACAGAATCTTGCACTCCAAATGAAGTAATGAGATGCATCCAAATAGGTCTTCTGTGTGTTCAAGAAGATCCAGCAGATAGACCTTCGATGTCATCCATACTTGTGATGCTTGAAATTTACCCTATGACTCTGCCAACCCCTTCGCAGCCTGCATTTTTCGTCGACAGGAGAACTGATCCAACAGCAATGTCAGTCAATGAGATGTCTGTTAGTGAAGTAATGCCTCGGTAA 1872 0.4514 MTTFLVMVSLQTFLLFFFITFLCSATTEAEPTYLYHNCSSNKTFAANSAFQSDRTRLLSSLASANTTDTDFYNSTVSGAGDTVYGLFMCRGDVSLTACHQCVVNATQRLATECRVSKEAIIWYDECLLRYSNHSFFSTVDTRPRVGLLNTGNVSNPASFMRTLYDIMNKTADEAAKPAVGKKKYKTGTANFSALQTVYTLAQCTPDLSPSDCRRCLSGVIGDLDWCCDGKQGGRVLYPSCNVRYELYPFYLSEAPAPTPTPAIVPATNTTGSQGKSGISSGTIVAIVVPISVAVLIFIVGICCLSKRMRKKHYSVPEGKSASDISNADSLQYDFSTIEAATNKFSEDNKLGEGGFGAVYKGTLANGHEIAVKRLSRGSGQEKILVYEYVPNKSLDYILFDPEKQRQLDWTKRYKIIKGVARGIQYLHEDSRPRIIHRDLKASNVLLDSDMNPKISDFGMARIFMVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLIEIISGKKNSSFYQMEGAEDLLSYAWNLWKHGDPLELLDPTITESCTPNEVMRCIQIGLLCVQEDPADRPSMSSILVMLEIYPMTLPTPSQPAFFVDRRTDPTAMSVNEMSVSEVMPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0319 623 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Lele33g0319 623 Pfam Protein tyrosine and serine/threonine kinase 380 582 IPR001245 GO:0004672|GO:0006468
Lele33g0319 623 FunFam Cysteine-rich receptor-like protein kinase 25 143 249 - -
Lele33g0319 623 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Lele33g0319 623 ProSiteProfiles Gnk2-homologous domain profile. 141 249 IPR002902 -
Lele33g0319 623 SMART serkin_6 344 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0319 623 ProSiteProfiles Protein kinase domain profile. 344 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0319 623 Gene3D Phosphorylase Kinase; domain 1 305 387 - -
Lele33g0319 623 SUPERFAMILY Protein kinase-like (PK-like) 330 608 IPR011009 -
Lele33g0319 623 Pfam Salt stress response/antifungal 152 247 IPR002902 -
Lele33g0319 623 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Lele33g0319 623 FunFam cysteine-rich receptor-like protein kinase 10 389 591 - -
Lele33g0319 623 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 31 134 - -
Lele33g0319 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Lele33g0319 623 Gene3D Transferase(Phosphotransferase) domain 1 389 590 - -
Lele33g0319 623 Gene3D - 30 135 IPR038408 -
Lele33g0319 623 Gene3D - 144 249 IPR038408 -
Lele33g0319 623 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0319 Lele-ChrLele33 1952342 1958809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0319 15 623 Receptor kinase-like Gene Family AT4G05200 47.156 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0319 PK_Tyr_Ser-Thr 7.8e-33 CL0016