Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0317 ATGTCCTTCTCCAAATTCTCTGCAACATCCTTCATCCTTCTCGCTCTGTTTCCATTTCTGAGTTTCACAAGCGAAGCATCACCTACTTTCAGCTCTAAGGCCTGCACAGACTCAGCCACTTACAAACCCAATAGCACATTTGAAGCCAATTTGAACGTTCTTCTGTCTGTTCTTACCTCCAACGCCTCCCTCCACGACGGTTTCTACCGTACCACCTTGGCTCAGGGAACTCCCGCCGTCGTCAACGGCCTTTTTCTCTGCCGCGGTGATGCCACCCCCACCCTCTGCCAAGAGTGCGTCGCCGACGCCGCCAAAGAGATAAGACGCCAGTGTCCAAACCAAACGGAGTCTATCGTCTGGTACGATGTTTGTATGCTTCGCTACTCCAACAACACCTTCAACAACATCGTCCCTTCCACGGACTTGTCGGATAACAGCAGTATAGCTAGCGCCGAACAGGATCAGTTCAATCAATTGTTGTCGAACATGTTGCAAAATTTGGCTGCAGAAGCTCAAAATTCACAGACGGGGAAGAAATTTGCTACACGACAAGTGAACCTAACATCGTCACAAACGTTGTACGGCCTTGTACAGTGTTACCCTGATCTGTCTCCTTTTGATTGCAACATGTGTCTCCAAAGCGCCATTGGAGGACTGCCAAATTGTTGTAGCAACAAGAAGGGGGCAAGGTCTCTGCTTCCAGCATGTAACATAAGATATGAACTTTATCCATTTTACAACACAACCCTGACATCCTCTGCACAACCAGTTCATCCTCGATCAGGAAAAAGCAACATCGCCATAATTGTTGCAATTACCGTGCCGATTGTTGTTTCTGTAGTACTTTTTGTTGCGGCTTGTTGTTTCCTGCGTAAGAGGGCTAGCAAGAAAAAGAAGTATAATTCGTTCAGACAGGATGACATTGGGAATGATCTTACTGACGTAGAGTCTCTGCAATTTGAATTGGCGACAATAGAAGCTGCCACAAAAAGGTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGCAGTTTATCAGGGTATCCTCCCAAACGGACAGGAGATTGCCGTGAAGAGGTTGTCGGTAACCTCGTTGCAGGGTGCTTTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACACAGGAATTTAGTGAGGCTATTGGGATTTTGCTTGGAAGGGCAAGAGAAGATACTTGTTTATGAATACATCCCAAACAAAAGCCTTGATCACTTCCTATTTGATCTTGAGAAGAAAACAATGCTTGATTGGTCAAGGCGTTACAAGATCATAATGGGAATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCTCAACTAAGAATAATACATCGTGATCTCAAAGCAAGCAATGTTTTATTAGATGTCAATATGAACCCAAAAATCTCAGATTTTGGCATGGCAAAAATCTTTCATGGAGAACAAACTCAAGTAAACACGGGAAGAATAGTTGGAACCTATGGTTATATGTCCCCAGAGTATGCAATGCGCGGGCAATTTTCTGTGAAATCAGATGTGTTTAGCTTTGGTATCTTAGTTTTGGAGATTGTAACCGGCAAGAAGAACACCGATGTTTATCAGTCACATCAAGCAGATGACCTCTTAAGCTGTGCCTGGGATAACTGGACACAGAAAACGCCATTGGAATTGTTGGATCCAACACTGAGAGCCGGCAGCTTTCATGCGCAGAACACCGAACAGGCAAAAGAATGTTGTTGA 1752 0.4458 MSFSKFSATSFILLALFPFLSFTSEASPTFSSKACTDSATYKPNSTFEANLNVLLSVLTSNASLHDGFYRTTLAQGTPAVVNGLFLCRGDATPTLCQECVADAAKEIRRQCPNQTESIVWYDVCMLRYSNNTFNNIVPSTDLSDNSSIASAEQDQFNQLLSNMLQNLAAEAQNSQTGKKFATRQVNLTSSQTLYGLVQCYPDLSPFDCNMCLQSAIGGLPNCCSNKKGARSLLPACNIRYELYPFYNTTLTSSAQPVHPRSGKSNIAIIVAITVPIVVSVVLFVAACCFLRKRASKKKKYNSFRQDDIGNDLTDVESLQFELATIEAATKRFSDENKIGQGGFGAVYQGILPNGQEIAVKRLSVTSLQGALEFKNEAALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDHFLFDLEKKTMLDWSRRYKIIMGIARGILYLHEDSQLRIIHRDLKASNVLLDVNMNPKISDFGMAKIFHGEQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGILVLEIVTGKKNTDVYQSHQADDLLSCAWDNWTQKTPLELLDPTLRAGSFHAQNTEQAKECC 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0317 583 SMART serkin_6 332 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0317 583 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Lele33g0317 583 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Lele33g0317 583 Pfam Salt stress response/antifungal 151 243 IPR002902 -
Lele33g0317 583 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Lele33g0317 583 Gene3D - 28 133 IPR038408 -
Lele33g0317 583 Gene3D - 141 245 IPR038408 -
Lele33g0317 583 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 582 - -
Lele33g0317 583 SUPERFAMILY Protein kinase-like (PK-like) 316 574 IPR011009 -
Lele33g0317 583 ProSiteProfiles Protein kinase domain profile. 332 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0317 583 Gene3D Phosphorylase Kinase; domain 1 291 407 - -
Lele33g0317 583 Gene3D Transferase(Phosphotransferase) domain 1 408 583 - -
Lele33g0317 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Lele33g0317 583 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Lele33g0317 583 Pfam Protein tyrosine and serine/threonine kinase 335 537 IPR001245 GO:0004672|GO:0006468
Lele33g0317 583 FunFam cysteine-rich receptor-like protein kinase 10 408 580 - -
Lele33g0317 583 FunFam Cysteine-rich receptor-like protein kinase 10 139 245 - -
Lele33g0317 583 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Lele33g0317 583 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0317 Lele-ChrLele33 1946156 1948732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0317 9 572 Receptor kinase-like Gene Family AT4G05200 48.718 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0317 PK_Tyr_Ser-Thr 8.3e-46 CL0016