Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0314 ATGGCAACTTCCAAATTCTACGCACTCACTTATCCTCTCTTGGTGTTCCTAACCATCTTCTCCATCACAAGCAAAGCTTCTTTTCATTACAGAGCTCATTACTGCTCAAACGCCACCATCTTCCCCACCAACACCACATTCAAACGAAATATAAACGTCCTCCTCTCCTCCCTCACCTCCAACGCTACCCAGTTCGGCGGCTACTATATGACCATCATGGGCTTCGGAACCACCGACGCAGTCAACGGCCTCTTCCTCTGCCGTGGGGACATCATCTCCCCCATCGCCTGCGAAGACTGCGTCACCGCCGCTGCCAAAGACATAACTACCCGTTGCCCTAACCGAACCGAGGCCATAATCTGGTACGACCAATGCATGCTGCGTTACACCGGCAAGTATTTCCGGTACGACAGCGTCATCCCCGGGGTAAACCTCCACGACGGCAAGAGCTTCTCCGGCAGGGACTTGGAACAGTTCAACGTCTCGTTATTCAACTTATTGAATGATTTGACATCGAAGGCTGCGAAACCACCGACGGTGAAGAAGTTTGCAGTCGGCCAAGCGATATTATCGACCTCGCCAGTGACCACGGTGTATGCTTTAGAGCAGTGCACCGATGACTTGACCAGTGATCAGTGTGAGACATGTCTGCGAAACGCCATTGGAAGTTTTGCCAATTGCTGTGAAGGAAAACAAGGCGCGAGGGTTCTTCTTGCTTCGTGCAACATCAGATACGAACTGTATCCCTTTTACAATGTAACGGCTGTATCGTCTGGGCCTGCAGTAACATTATCTACTCCTTCAGGAAAGGAGAAAACCGAAAGGCGAACAATTGTTGTAATTGTTGTGCCAGTTTCAGTTGTTGTTATGATCTTCTGTCTTGGAGGTTTTTTCCTGCTGAAAACAACGAAGAAGCATAAGAATGTAGCATTTAATGAAAGTCATGGAGAAGAAATTACCCCTCTAGAGTCTTTGCAATTCTCTTTTGCTACCATTGAAGCGGCGACAAACAATTTTTCACAGCTTAACAAAATAGGCAGAGGTGGATTTGGGGAAGTCTACAAGGGTGTGCTTCCAGATAAACGAGAAATAGCTGTTAAGAAACTCTCAAGTAAATCTAAGCAGGGTGTGGTGGAATTTAAGAATGAAATTTCACTTATTGCCAAGCTTCAGCATAGAAATCTGGTTGCCTTATTTGGATTTTGCTTGCAAGAAGAGGAGAAGATGCTGATTTATGAATATGTGCCTAACAAGAGTCTTGATTACTTTTTATTTGATTCTAATCCAAGTCGAAGGATATTGAATTGGTCTGAACGTTATATGATCATAGGAGGTATTGCAAGAGGAATTTTATATTTACATGAGCATTCTCGGCTGAAAGTTATACACCGTGATCTCAAGCCTAGTAACGTGTTATTAGATGATAATATGTTTCCAAGAATATCTGACTTCGGCTTAGCAAGAATAGTTTCAATAGATCAAAATCAAGGAAGCACTAACAGAATCGTTGGAACATATGGTTATATGTCTCCTGAATATGCGATGCACGGACAATTTTCAGAAAAATCAGATGTATATAGTTTTGGAGTTATAATTCTAGAAATAATTAGTGCAAAAAGAAATGCTCGGTCCCCAAAGTCAAAGATTTTTGAAGATCTTTTAAGTCAGGCATGGAGACAATGGAGGAATCATACCCCACTGGAAATTATGGAATCAAACCTAAAAGAATCATATTGTCACACCGAAGTCATAAAGTGCATTCAAATTGGGTTATTGTGTGTGCAAGAAGACCCAGATGATAGGCCTACAATGGCCACAGTTATTTCATACCTTAATTCCCAATTAGTCGATTTGCCGTTTCCAAGAGAACCTGCTCTCTTCAGATACAGTGTTGGGAAATCAACCAACATGGAAGATGGAGATTGCAGTTCAGGTCACCAATCCTCCATTAATTCCTCACCTTCTTCCATCAATGACATGTCCAAGAGTACTTTTTTCCCTCGATAG 2007 0.4285 MATSKFYALTYPLLVFLTIFSITSKASFHYRAHYCSNATIFPTNTTFKRNINVLLSSLTSNATQFGGYYMTIMGFGTTDAVNGLFLCRGDIISPIACEDCVTAAAKDITTRCPNRTEAIIWYDQCMLRYTGKYFRYDSVIPGVNLHDGKSFSGRDLEQFNVSLFNLLNDLTSKAAKPPTVKKFAVGQAILSTSPVTTVYALEQCTDDLTSDQCETCLRNAIGSFANCCEGKQGARVLLASCNIRYELYPFYNVTAVSSGPAVTLSTPSGKEKTERRTIVVIVVPVSVVVMIFCLGGFFLLKTTKKHKNVAFNESHGEEITPLESLQFSFATIEAATNNFSQLNKIGRGGFGEVYKGVLPDKREIAVKKLSSKSKQGVVEFKNEISLIAKLQHRNLVALFGFCLQEEEKMLIYEYVPNKSLDYFLFDSNPSRRILNWSERYMIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMFPRISDFGLARIVSIDQNQGSTNRIVGTYGYMSPEYAMHGQFSEKSDVYSFGVIILEIISAKRNARSPKSKIFEDLLSQAWRQWRNHTPLEIMESNLKESYCHTEVIKCIQIGLLCVQEDPDDRPTMATVISYLNSQLVDLPFPREPALFRYSVGKSTNMEDGDCSSGHQSSINSSPSSINDMSKSTFFPR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0314 668 Gene3D - 147 250 IPR038408 -
Lele33g0314 668 Gene3D - 27 134 IPR038408 -
Lele33g0314 668 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Lele33g0314 668 ProSiteProfiles Protein kinase domain profile. 339 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0314 668 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 134 - -
Lele33g0314 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Lele33g0314 668 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Lele33g0314 668 FunFam Cysteine-rich receptor-like protein kinase 10 143 250 - -
Lele33g0314 668 ProSiteProfiles Gnk2-homologous domain profile. 139 250 IPR002902 -
Lele33g0314 668 CDD STKc_IRAK 345 612 - -
Lele33g0314 668 FunFam cysteine-rich receptor-like protein kinase 10 415 618 - -
Lele33g0314 668 SMART serkin_6 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0314 668 Pfam Protein tyrosine and serine/threonine kinase 342 610 IPR001245 GO:0004672|GO:0006468
Lele33g0314 668 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Lele33g0314 668 Pfam Salt stress response/antifungal 156 248 IPR002902 -
Lele33g0314 668 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Lele33g0314 668 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 414 - -
Lele33g0314 668 MobiDBLite consensus disorder prediction 638 668 - -
Lele33g0314 668 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Lele33g0314 668 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Lele33g0314 668 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0314 Lele-ChrLele33 1935848 1938538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0314 11 668 Receptor kinase-like Gene Family AT4G05200 44.940 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0314 PK_Tyr_Ser-Thr 1.5e-49 CL0016