Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0313 ATGTTTCTCTTCAAAATCTCTCTTCTTCCCCTTTCTGCGTTTCTTTTCACATCCTTCTTCTCAACGCAAGCTCTCGCAGCTCCCGTTTTCAATGGCCATTACTGCAACACCACCACCACGTACCCACCCAACTCCACATTTCAACGTAATATCAATGCTCTACTCTCTTCTCTCACATCCAACGCCTCCCTTGACTCCTCTGGCTCCTACAACACCGTCATGGGCTTTGGCACCCCCTACGCCGTCAACGGCTTCTTCCTCTGCCGCGGCGACATCACCTTGTCTACTTGTCAGGACTGCGTCACCGCCGCCGCCAAAGACGCTGTTTCCCGTTGCCCTAACCAAACTGAGGCCGTCATCTGGTACGACGTCTGCACGCTGCGTTTCACCAACATGTTCTTCCGGTTTGGGAGCGCCTCTCCCGGCATGAATATGACGGATGAGAAGAGCGTATCTAGCACCGACATTAACCGATTCAACCAGTCGTTGTTCAGATTGTTGGATGATCTGGACACGCGAGCTGCGAATTCGGACACGGATAAGAAGTTCGCAACAGGGGATGTGAGGGTTACGAGCTCGATGACTGTGTATGGGCTTGCACAATGCTCGAAGGAAATGACCTCCGAACAATGTGAAACGTGTTTGCAGAACGCCATCGGAATTCTTCCGGTATGCTGTGAGGGAAAGCAAGGCGCCAGAGTTCTGCTTTCGCCCTGTAATGTGAGATACGAGTTGTTCCAATTTTACAATTCAACCACTTCGTCACCTGGAAAGAAGAGATATGGATCAGGAACAATTGCAATGATTGTTATCCTTGTTGTATTTTTTGTAATCCTCTTATGTTTAGGCTGCTATTTCCTGCTGAGAAGATCAAGGAAGAGTCGTGGGACTATTCTAAGAGAACATTTTGGAAATGAAAGTGAGGCTTTGGAGTCATTGCAATTTAGTTTGGCTACAGTTGAAGCAGCTACAAACAAGTTTTCACACCGGAATAAGATAGGCAAGGGTGGATTTGGAGAAGTTTACAAGGGTGTTCTTCAAGACGGACGAGAAATAGCAGTTAAAAAACTTTCTAAAAGTTCAGGACAAGGTTCAATAGAATTCACCAATGAGATTTTACTCATAGCCAAGCTTCAACACAGGAATCTAGTGGCTTTGCTAGGATTTTGCTTGGAAGCAGAAGAGAAGATGCTTATCTATGAATATGTGCCCAACAAAAGCCTTGATTACTTTTTATTTGATTCTCAACGGAAAAAACTACTGAATTGGGCTCAGCGTTACAGAATCTTGGATGGAATTGCACGAGGAATTCTTTATTTGCATGAGTACTCAAGACTTAAAGTTATACACCGTGATCTTAAACCTAGTAACGTGTTGTTGGATGATAATATGAATCCAAAAATCTCAGACTTCGGTTTAGCAAGAATAATTGCTATAGATGATGATCGAGGAAAGACAAGAAGAATAGTTGGAACCTACGGATACATGTCTCCAGAATATGCTATGCATGGACAATTTTCTGAAAAGTCTGACGTATTCAGTTATGGGGTCATAACTTTGGAGGTAATTAGTGCAAAAAGAAATTCCCGATCACATGACTCGCATAATGTTGATGACCTTATTAGTCATGCTTGGAGGCAATGGAGGGATCAAACACCATTGGAAATACTGGACCCAGATGTAAAAGAAGCTTGCCCACAAAGCGAAGTGATGAAGTGCATTCAGATTGGTTTATTATGTGTGCAAGAAAATCCAAATGAGAGACCTACAATGGCAAACGTTGTTTCATACTTTACTAGTCCTTCAGCCGAATTGCCTCTACCTCGGCAACCAGCATTTTTGATGAACAATGTAGTAGCAGGGGAATCCAGTTCAGGCTCCAGATCTTTATACTCTGTCAATGATTTGTCTATTAGTAATTCTTTCCCTCGGTTAATTATCCCAAAATGTCTTCATAATTCGCATCTAACCTGCCGTGCTACGAATAAATGTCAGATTGGCGCGCCAAGGGAGACTCCACTCGTCAGTCGTCAAACGCGCCAATTCGACGGCGGCTTCTGTCTTCAGAGTTCAGACTTGTCAAAACTTGATCCTTCGTTCCCATTCATAATCTCTGTCCATGGCCACTTTTTGTCCTCTTCAATCTTCATTTTTCGACAAAAGTACATTCTCCATTATTATATTCCCACTATGCTTCTCTTCCCAAACTCTCTTCTTTCCCTTTCGGCGTTTCTTTTCGCCACATTCTTGGCAACCCCTGCTCTCACAACTCCCGTTTACAATGGCCATTTCTGCGACAACGCGACCACGTATCAGCCCAACTCCACATATCAACGTAATCTTAATGTACTCCTATCTTCTATCTCCTCCAACGCCTCCCGAGACGCCTCTGGTTCCTACAGCACCGCCATGGGCGCAGGCACCCCCGACCTCGTCAACGGCTACTACCTCTGCCGCGGCGATATCACCACCACCACTTGTCACGACTGTGTTGTTGCAGCCGCCAGTGACATTATTTCCCGATGCCCTAGCCAAAAAGTGGCTGTCCTCTGGTACGACGTCTGCACGCTGCGTTTCACCAACTCATACTTCCCATTTGGAAGCGTCGTTCCTGGAATGAATTTGACGGACGGGAAAAGCGTATCTAACAATGACATTAACCAATTCAACCAGTCGTTGTTTGGACTGTTGAATGATTTGGGAACACAAGCTGCGAATTCGGAGACGGCGAAGAAATTCGCGACAGGAGACGTGAGGATTACGAGCTCGATGACCGTGTATGGGCTTGCGCAATGCTCGTTGGAATTGAGCTCCGCACAATGTGTGACGTGTTTGCAGAAGGCCGTCGGAGTTCTTCCGTCATGCTGTGGGGGAAGACAGGGCGCGAGAGTCCTGCTTGCACCCTGTAATGTGAGATACGAGTTGTACCAATTTTACAATTCAACTACTTCTGGAAAGAAGAAATATGGATCAGGAACAATTGCCTTGATTGTTATCCTTCCTCTTGTTTTTATTATTCTCTTATGTTTAGGTTGCTATTTCCTGCTGAGAAGATCAAGGATGCGTTATAGAAGTAGAACCATTCTAAGAGAACATTTTGGAAACGAAACTGGGGCATTGGAGTCATTGCAATTTAGTTTGGCTACACTTGAAGCAGCGACAGACAAGTTTTCACACCAGAAGAGGATAGGCCAAGATTCCCAAAGAAGAGGGCTCCTGAATTGGGCTCAACGTTATAGAATCATGGAAGGAATTGCACGAGGAATTCTTTACTTACATGAGCACTCAAAGCTCAAAGTTATACACCGTGACCTTAAACCTAGTAATGTATTGTTGGATGATAATATGAATCCAAAAATCTCAGACTTTGGTATGGCAAGAATAGTTGCTATAGATCATGACCAAGGAAAAACAAGAAGAATAGTTGGAACATATGGCTATATGTCTCCAGAGTATGCGATGCATGGGCAATTTTCTGAAAAGTCTGATGTTTTTAGTTTTGGGGTAATAACTTTGGAGGTAATTAGTGCAAAAAGAAATGCACGATCACTTGACTCAGATAATGTTGACGACCTTATTAGTCATGGGAATCCAGTTCAGGCTCCAGATCCTTATACTCGCTAA 3624 0.4429 MFLFKISLLPLSAFLFTSFFSTQALAAPVFNGHYCNTTTTYPPNSTFQRNINALLSSLTSNASLDSSGSYNTVMGFGTPYAVNGFFLCRGDITLSTCQDCVTAAAKDAVSRCPNQTEAVIWYDVCTLRFTNMFFRFGSASPGMNMTDEKSVSSTDINRFNQSLFRLLDDLDTRAANSDTDKKFATGDVRVTSSMTVYGLAQCSKEMTSEQCETCLQNAIGILPVCCEGKQGARVLLSPCNVRYELFQFYNSTTSSPGKKRYGSGTIAMIVILVVFFVILLCLGCYFLLRRSRKSRGTILREHFGNESEALESLQFSLATVEAATNKFSHRNKIGKGGFGEVYKGVLQDGREIAVKKLSKSSGQGSIEFTNEILLIAKLQHRNLVALLGFCLEAEEKMLIYEYVPNKSLDYFLFDSQRKKLLNWAQRYRILDGIARGILYLHEYSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIIAIDDDRGKTRRIVGTYGYMSPEYAMHGQFSEKSDVFSYGVITLEVISAKRNSRSHDSHNVDDLISHAWRQWRDQTPLEILDPDVKEACPQSEVMKCIQIGLLCVQENPNERPTMANVVSYFTSPSAELPLPRQPAFLMNNVVAGESSSGSRSLYSVNDLSISNSFPRLIIPKCLHNSHLTCRATNKCQIGAPRETPLVSRQTRQFDGGFCLQSSDLSKLDPSFPFIISVHGHFLSSSIFIFRQKYILHYYIPTMLLFPNSLLSLSAFLFATFLATPALTTPVYNGHFCDNATTYQPNSTYQRNLNVLLSSISSNASRDASGSYSTAMGAGTPDLVNGYYLCRGDITTTTCHDCVVAAASDIISRCPSQKVAVLWYDVCTLRFTNSYFPFGSVVPGMNLTDGKSVSNNDINQFNQSLFGLLNDLGTQAANSETAKKFATGDVRITSSMTVYGLAQCSLELSSAQCVTCLQKAVGVLPSCCGGRQGARVLLAPCNVRYELYQFYNSTTSGKKKYGSGTIALIVILPLVFIILLCLGCYFLLRRSRMRYRSRTILREHFGNETGALESLQFSLATLEAATDKFSHQKRIGQDSQRRGLLNWAQRYRIMEGIARGILYLHEHSKLKVIHRDLKPSNVLLDDNMNPKISDFGMARIVAIDHDQGKTRRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVITLEVISAKRNARSLDSDNVDDLISHGNPVQAPDPYTR 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0313 1207 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
Lele33g0313 1207 FunFam Cysteine-rich receptor-like protein kinase 10 872 978 - -
Lele33g0313 1207 MobiDBLite consensus disorder prediction 1187 1207 - -
Lele33g0313 1207 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 134 - -
Lele33g0313 1207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1100 1112 IPR008271 GO:0004672|GO:0006468
Lele33g0313 1207 Pfam Protein tyrosine and serine/threonine kinase 330 596 IPR001245 GO:0004672|GO:0006468
Lele33g0313 1207 FunFam cysteine-rich receptor-like protein kinase 10 1059 1199 - -
Lele33g0313 1207 SUPERFAMILY Protein kinase-like (PK-like) 1069 1203 IPR011009 -
Lele33g0313 1207 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Lele33g0313 1207 Pfam Salt stress response/antifungal 883 976 IPR002902 -
Lele33g0313 1207 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Lele33g0313 1207 Pfam Salt stress response/antifungal 765 861 IPR002902 -
Lele33g0313 1207 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 758 864 - -
Lele33g0313 1207 Gene3D Phosphorylase Kinase; domain 1 292 402 - -
Lele33g0313 1207 ProSiteProfiles Gnk2-homologous domain profile. 139 248 IPR002902 -
Lele33g0313 1207 ProSiteProfiles Protein kinase domain profile. 973 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0313 1207 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Lele33g0313 1207 CDD STKc_IRAK 333 599 - -
Lele33g0313 1207 SUPERFAMILY Protein kinase-like (PK-like) 311 620 IPR011009 -
Lele33g0313 1207 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0313 1207 Gene3D - 759 864 IPR038408 -
Lele33g0313 1207 Gene3D - 143 248 IPR038408 -
Lele33g0313 1207 Gene3D - 873 978 IPR038408 -
Lele33g0313 1207 Gene3D - 29 134 IPR038408 -
Lele33g0313 1207 ProSiteProfiles Gnk2-homologous domain profile. 869 978 IPR002902 -
Lele33g0313 1207 FunFam Cysteine-rich receptor-like protein kinase 10 142 248 - -
Lele33g0313 1207 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Lele33g0313 1207 Pfam Protein kinase domain 1069 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0313 1207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Lele33g0313 1207 ProSiteProfiles Protein kinase domain profile. 327 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele33g0313 1207 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 288 402 - -
Lele33g0313 1207 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 622 - -
Lele33g0313 1207 ProSiteProfiles Gnk2-homologous domain profile. 759 864 IPR002902 -
Lele33g0313 1207 Gene3D Transferase(Phosphotransferase) domain 1 403 604 - -
Lele33g0313 1207 Gene3D Transferase(Phosphotransferase) domain 1 1059 1205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0313 Lele-ChrLele33 1925381 1932947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0313 4 644 Receptor kinase-like Gene Family AT4G05200 43.319 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0313 Pkinase 2.8e-49 CL0016