Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0312 ATGGCTGTGGTTTCTCTTAGAATGCTTTCCTTTCTCTGTCTCCTTCCCATGCTCATATCTCAAATCACTGCCCAGCCCGAGTTCCGAGTTCATAGCTGTAACGATGGTAATGGCAACTACACTGCTAATAGTGCCTACCAGACCAATCTCAATACCCTTTTGTCCGATATTGTTTCCAACACAGAAATTGACTATGGCTTCTACAACTTCTCTTATGGCCAAAACTCTGACAAGGTTAATGCAATAGGGTTGTGCAGAGGAGATGTTGCCCCAGATTTATGCCGCAGTTGCCTCAATGATTCTAGAACCCTCCTTTCCCGGCTCTGTCCAAATCAGATGGAGGCAATTGGATTCTATGACAAGTGCATGTTACGCTATTCAAACCGTTCGATATTTAACGCCCCGGAAAATTCGCCTTCCTTCTGCTTGTGGAACAATGAGAATGCAACAGCTGTGAATCAGTTCAATGAAGCGCTGAGGAATTTGTTGGATGGTTTAAGGAGCAGGGCTTCAGCTGGGAACTCTCTTCGTAAGTTTGCTGCAGCAAATGTTGCAGGTCCAAACTTTCAGACTCTATATGGTTCTGTGCAGTGTACACCTGATTTATCTTCAGATCAGTGCAATGACTGCTTGGTTGAGGCAATCTCAGGACTCCCACAATGTTCTGGTGGCAAGGCTGGTGGTAGAATTTTAAGACCAAGCTGTAGTTTTAGATATGAAAAAAACCGCTTCTTCAACGATACCAATGATTCAACACCGCCATCAGAAGGAAAGAGCAACACATCACGAACTATAATTGCCATAGTTGTGCCAATTGCTTCCCTTGGTGTCTTGCTCGTTCTTGTCTGCATCTGTTTAAGAATGAGGAAACGGCGGAAACATATCAAAAATGATGACTTTGAAGCTGACGGTGAAATCAAGTCATCTGAGACATTGCAATTGAAGTATGACACCATCATAGCTGCCACAAATAACTTTTCTGAAGAAAATAAGCTTGGACAAGGCGGATTTGGACCTGTTTACAAGATTCTCGCTTGCGGATTTGGATATATGGCACCTGAATATCTAATGTATGGACAATTCTCGGTGAAGACGGATGTTTTCAGTTTTGGTGTGCTAGTTCTAGAGATTGTAACTGGTCGTAAAAATAGTGAGATTTTCCAAGGGGAGAATGCAGAGAATCTAGTCAGTTTTGCATGGAGAAACTGGAGGGAAGGAACAACCACAAGTATTGTGGACCCCGCGATTACCGGAGGTTCAAGAGATGAAATAATGAGATGCATCCACATAGCATTGCTCTGTGTTCAAGATGATGTAGCTGACAGACCAACCATGGCTTCAGTTGAAGTCATGCTTAACAGCTATTCTGCCACCTTTCCATTGCCTTCGCAACCTGCTTCTTACATTAATAGTAGAAATTTTTCATACAGCAGGTCTGGAGAATACACTTCAGGGCCAACAAGATCAAATGAACTCGTAAACCAATCTGTTCAAGCATTATCGAATGAAGCATCAATCTCTAAGCCATTTCTTCGTTAG 1539 0.4282 MAVVSLRMLSFLCLLPMLISQITAQPEFRVHSCNDGNGNYTANSAYQTNLNTLLSDIVSNTEIDYGFYNFSYGQNSDKVNAIGLCRGDVAPDLCRSCLNDSRTLLSRLCPNQMEAIGFYDKCMLRYSNRSIFNAPENSPSFCLWNNENATAVNQFNEALRNLLDGLRSRASAGNSLRKFAAANVAGPNFQTLYGSVQCTPDLSSDQCNDCLVEAISGLPQCSGGKAGGRILRPSCSFRYEKNRFFNDTNDSTPPSEGKSNTSRTIIAIVVPIASLGVLLVLVCICLRMRKRRKHIKNDDFEADGEIKSSETLQLKYDTIIAATNNFSEENKLGQGGFGPVYKILACGFGYMAPEYLMYGQFSVKTDVFSFGVLVLEIVTGRKNSEIFQGENAENLVSFAWRNWREGTTTSIVDPAITGGSRDEIMRCIHIALLCVQDDVADRPTMASVEVMLNSYSATFPLPSQPASYINSRNFSYSRSGEYTSGPTRSNELVNQSVQALSNEASISKPFLR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0312 512 Gene3D Transferase(Phosphotransferase) domain 1 347 472 - -
Lele33g0312 512 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Lele33g0312 512 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Lele33g0312 512 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Lele33g0312 512 Pfam Protein tyrosine and serine/threonine kinase 349 448 IPR001245 GO:0004672|GO:0006468
Lele33g0312 512 Gene3D Phosphorylase Kinase; domain 1 287 346 - -
Lele33g0312 512 Pfam Salt stress response/antifungal 145 241 IPR002902 -
Lele33g0312 512 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Lele33g0312 512 Gene3D - 139 244 IPR038408 -
Lele33g0312 512 Gene3D - 25 130 IPR038408 -
Lele33g0312 512 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11 254 - -
Lele33g0312 512 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Lele33g0312 512 SUPERFAMILY Protein kinase-like (PK-like) 347 479 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0312 Lele-ChrLele33 1920122 1922937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0312 348 464 Receptor kinase-like Gene Family AT4G05200 48.305 5.75e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele33g0312 PK_Tyr_Ser-Thr 3.5e-08 CL0016