LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele33g0296	ATGTCTTGCTTGCCGGCCGATGCTTTTGCAGCCGGTAACTTGCTCTGCAGTGAGGATGCCGATGAAGTGATCTCCGGCGAAAACCACCCGTCGTCGTCATACTTGCCGTCGTATTCACCGCCTTCCGACGACGCAACCATCGGCGGACTCATCGACGTCGAGGCACATCACATGCCCGACCCAGATTACCTACGGCGGTGCCGTTATCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCTTGAAGGTTCACGCACATTACGAGTTTCAACCGGTAACGGCGTTCCTCTCTGTCAACTACTTCGATCGTTTTCTCTCATGCTCTCCACTTCCGCAAAATAGTCAATGGGAGTATCATCTGATATCATTGGCATGCTTGTCCTTGGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACCGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAGACGATTCAAAGAATGGAGCTCTTTGTCATGACCAAGCTATGCTGGAGATTACGCTCCATAACACCCTTCGATTATCTCCATTACTTCATCTCTAAGCTCCCTTGCTCCTCCGATCCGCAACCCGAATTCATAACCCGGTTCTTAACCCATGCTTCCCATATCATCCTCAGCACCACCCTTGTGATCGATTTCCTGGGTTTTACGCCGTCGACCATAGCGGCGGCCGCCGTTCTCTGTTCAGCTGGCCAGGGCAAATCGCCACCGTTCTTTCATGATGGAGTAAACAAAGAAATGGTGAGAAGCTGTCGACAACTAATGGAGGATTACGTGGTGGACACGTGTCCCTTTGCTGGCTATAAATGCCCTGGAGAAGAGCCGGAGCCGCCTTCTAGTCCAGTAGGCGTGCTCGACGCGGCTAGTTCATGTGTCAGTTGCGAGACTCGCTCCTCTGAGAACCCAGCGTCAACCAGCGAAGCCGAGCCGCCCAACAAGCGGACGCGATCCCCTGAGCCTAATGGGGTATAG	1002	0.5269	MSCLPADAFAAGNLLCSEDADEVISGENHPSSSYLPSYSPPSDDATIGGLIDVEAHHMPDPDYLRRCRYRLIDVTARQDSINWILKVHAHYEFQPVTAFLSVNYFDRFLSCSPLPQNSQWEYHLISLACLSLAAKMEEPEVPLLPDLQLVDPRFVFEPKTIQRMELFVMTKLCWRLRSITPFDYLHYFISKLPCSSDPQPEFITRFLTHASHIILSTTLVIDFLGFTPSTIAAAAVLCSAGQGKSPPFFHDGVNKEMVRSCRQLMEDYVVDTCPFAGYKCPGEEPEPPSSPVGVLDAASSCVSCETRSSENPASTSEAEPPNKRTRSPEPNGV	333

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele33g0296	333	SUPERFAMILY	Cyclin-like	47	176	IPR036915	-
	Lele33g0296	333	MobiDBLite	consensus disorder prediction	305	321	-	-
	Lele33g0296	333	MobiDBLite	consensus disorder prediction	305	333	-	-
	Lele33g0296	333	PANTHER	CYCLINS	52	269	IPR039361	-
	Lele33g0296	333	Pfam	Cyclin, N-terminal domain	51	176	IPR006671	-
	Lele33g0296	333	FunFam	D6-type cyclin	174	263	-	-
	Lele33g0296	333	SMART	cyclin_7	82	170	IPR013763	-
	Lele33g0296	333	Gene3D	-	60	177	-	-
	Lele33g0296	333	CDD	CYCLIN	77	169	IPR013763	-
	Lele33g0296	333	ProSitePatterns	Cyclins signature.	77	108	IPR006671	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele33g0296	Lele-ChrLele33	1816358	1818099	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele33g0296	13	272	Core Cell Cycle Gene Families	AT1G70210	44.815	1.98e-71	223

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