Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0296 ATGTCTTGCTTGCCGGCCGATGCTTTTGCAGCCGGTAACTTGCTCTGCAGTGAGGATGCCGATGAAGTGATCTCCGGCGAAAACCACCCGTCGTCGTCATACTTGCCGTCGTATTCACCGCCTTCCGACGACGCAACCATCGGCGGACTCATCGACGTCGAGGCACATCACATGCCCGACCCAGATTACCTACGGCGGTGCCGTTATCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCTTGAAGGTTCACGCACATTACGAGTTTCAACCGGTAACGGCGTTCCTCTCTGTCAACTACTTCGATCGTTTTCTCTCATGCTCTCCACTTCCGCAAAATAGTCAATGGGAGTATCATCTGATATCATTGGCATGCTTGTCCTTGGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACCGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAGACGATTCAAAGAATGGAGCTCTTTGTCATGACCAAGCTATGCTGGAGATTACGCTCCATAACACCCTTCGATTATCTCCATTACTTCATCTCTAAGCTCCCTTGCTCCTCCGATCCGCAACCCGAATTCATAACCCGGTTCTTAACCCATGCTTCCCATATCATCCTCAGCACCACCCTTGTGATCGATTTCCTGGGTTTTACGCCGTCGACCATAGCGGCGGCCGCCGTTCTCTGTTCAGCTGGCCAGGGCAAATCGCCACCGTTCTTTCATGATGGAGTAAACAAAGAAATGGTGAGAAGCTGTCGACAACTAATGGAGGATTACGTGGTGGACACGTGTCCCTTTGCTGGCTATAAATGCCCTGGAGAAGAGCCGGAGCCGCCTTCTAGTCCAGTAGGCGTGCTCGACGCGGCTAGTTCATGTGTCAGTTGCGAGACTCGCTCCTCTGAGAACCCAGCGTCAACCAGCGAAGCCGAGCCGCCCAACAAGCGGACGCGATCCCCTGAGCCTAATGGGGTATAG 1002 0.5269 MSCLPADAFAAGNLLCSEDADEVISGENHPSSSYLPSYSPPSDDATIGGLIDVEAHHMPDPDYLRRCRYRLIDVTARQDSINWILKVHAHYEFQPVTAFLSVNYFDRFLSCSPLPQNSQWEYHLISLACLSLAAKMEEPEVPLLPDLQLVDPRFVFEPKTIQRMELFVMTKLCWRLRSITPFDYLHYFISKLPCSSDPQPEFITRFLTHASHIILSTTLVIDFLGFTPSTIAAAAVLCSAGQGKSPPFFHDGVNKEMVRSCRQLMEDYVVDTCPFAGYKCPGEEPEPPSSPVGVLDAASSCVSCETRSSENPASTSEAEPPNKRTRSPEPNGV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0296 333 SUPERFAMILY Cyclin-like 47 176 IPR036915 -
Lele33g0296 333 MobiDBLite consensus disorder prediction 305 321 - -
Lele33g0296 333 MobiDBLite consensus disorder prediction 305 333 - -
Lele33g0296 333 PANTHER CYCLINS 52 269 IPR039361 -
Lele33g0296 333 Pfam Cyclin, N-terminal domain 51 176 IPR006671 -
Lele33g0296 333 FunFam D6-type cyclin 174 263 - -
Lele33g0296 333 SMART cyclin_7 82 170 IPR013763 -
Lele33g0296 333 Gene3D - 60 177 - -
Lele33g0296 333 CDD CYCLIN 77 169 IPR013763 -
Lele33g0296 333 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Lele33g0296 333 Pfam Cyclin, C-terminal domain 179 269 IPR004367 -
Lele33g0296 333 Gene3D - 50 241 - -
Lele33g0296 333 SUPERFAMILY Cyclin-like 180 271 IPR036915 -
Lele33g0296 333 SMART Cyclin_C_2 179 287 IPR004367 -
Lele33g0296 333 FunFam D6-type cyclin 60 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0296 Lele-ChrLele33 1816358 1818099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0296 13 272 Core Cell Cycle Gene Families AT1G70210 44.815 1.98e-71 223