Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0285 ATGTGTTGTCCACTACAAGTTTCTGAACCAGCACAAGAGGATGATGATAAAACCAGCAACCTGGGGGAGATCTCTGCAAAGAGATCAAGCCGCTCAGTTGAGATACAGGAGAACAACAGGAATGTTAAACCAAAGTGTTCATCAGATGATGATGACTCCATTGCTTCTCAGAAAGAAGACACAAGCCCTAAAAACAATACAGATCTTAAGTCAAATCGGAAATCAAGATCTGAAAGAGGTGCTGCCTCTGATCCTCAGAGCCTCTTCGCAAGAAGAAGAAGAGGGAGAATAAATGAAAGGTTGAGAATCCTACAAAACCTGGTCCCTAATGGAACTAAGGTGGATATAAGCACTATGCTTGAGGAAGCTGTCCAGTATGTGAAATTTTTACAGCTACAAATTAAGCTTCTTAGCTCTGATGACCTGTGGATGTACGCTCCAATTGCCTACAATGGATTGAATATTGGATTAGATCTCAATATCACCCCAACCAAACGACTCTAA 504 0.4147 MCCPLQVSEPAQEDDDKTSNLGEISAKRSSRSVEIQENNRNVKPKCSSDDDDSIASQKEDTSPKNNTDLKSNRKSRSERGAASDPQSLFARRRRGRINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGLDLNITPTKRL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0285 167 MobiDBLite consensus disorder prediction 1 88 - -
Lele33g0285 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 147 IPR036638 GO:0046983
Lele33g0285 167 FunFam Basic helix-loop-helix transcription factor 82 139 - -
Lele33g0285 167 Gene3D - 73 139 IPR036638 GO:0046983
Lele33g0285 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 81 130 IPR011598 GO:0046983
Lele33g0285 167 MobiDBLite consensus disorder prediction 43 80 - -
Lele33g0285 167 SMART finulus 87 136 IPR011598 GO:0046983
Lele33g0285 167 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 13 139 IPR045843 GO:0003700|GO:0006355
Lele33g0285 167 CDD bHLH_AtIND_like 82 144 - -
Lele33g0285 167 MobiDBLite consensus disorder prediction 23 42 - -
Lele33g0285 167 Pfam Helix-loop-helix DNA-binding domain 91 131 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0285 Lele-ChrLele33 1739092 1740154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0285 22 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 62.500 5.79e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g0285 HLH 7.2e-09 No_clan