Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0269 ATGTTCAAAATGAACTGTGATTTAGGCAAGAGTTGTCAGAATGGGGAAGGTTCATGCTTTCGACATGATACCGTAGAGCAGGCCAATGCTATCAGCATGGAGGCTCCCTCAGATCAAATGAATAGCAAAAATGGGGAGCTAATGCACCATGATAACAACACCTCAGCCCAGCTGCATACAATTGATTTGGGAATTACACATTCTGAATTGCCAGAAAAACCTAATCAGATTGATTCTGAGTCTTTGGATAATGAACAAAAGGTTATTGGAACTAGGGAAACCACCTTTCTTATTGATGAAAAATCACCTTCAGATGGTGTGATTGGGAATTCTGCTTTTCAACTTCCTGCACAACCTCAATGTGACTTAGACAAAAGCTGTCAAACTGAAAAAGGTTCAGGTTTTCAACATAAGACTTTAGAACTGGGCAATTCTATTGGCATGGATGCTTCCTCAGAGAACTTGAGTAGCAAAACTAGAAAGTCTTTGTGCCATATCCATAAGACCTCAGAACAGTTGCATACACTTGATCCCAGAACTGCTCATTTTAAAACATCTGAGAAAACTACTCAGACTGGCTCCAAATTTTTGAACAATGAACAAAGGGTCCTAGGCAATGAGGAAACCAGCTCTCTTCTTGATGAAAAACAACTTACAGTTTCTGACAGTATGATTGGAGATTCTGTCATTCAATTGGCAACACAATCTCAGGGCGACTTAGACAATAGTTGCCAGAATGGAGGGGGTTCATGCTTTCAACACAATACCTTAAAACAGATTTCTGGTTTTTTATCTAATGATGAATCTCAGAACAAACGTCAGCAGGTGTCCAAAAATGAAAATAATGAACCTGTGGAAAGAAGTGGTGCAATTGAACAATTAGATCCACCTTCTCAAGAAACTCCCATGGGCAGTAGTCCAAACTCTTTGCAAAGAAACTCCAAAAGGGAAACTCGTGCCCGGTTAGGGTGCAAGGATAAAAGAACTACAACATCATTGAAGAAAAAATATATTCTAAGAAGTAGTGACAGAGTTTTGCGATCAAGGGTGCGTGAAAAACCTAAACCATCCCAATCAAACACTAATTTGGTTAATGTGGATCATGTTGGAGAAAATAGAAGAAAAGGCAGGAAGAAGAATAAGGGTGGAGGGAGGATAGTGACTGATGAATATTCAAGGATCAGAGCTCGTCTAAGATATTTTTTAAGTCGAGTGAGCTATGAGCAGAACTTGATTGATGCTTATTCTGGTGAGGGCTGGAAAGGATATAGCTTGGAAAAATTAAAACCTGAGAAGGAGCTTCAACATGCTAAGTCTAAAATACTTGGTTTTAAATTGAAAATTAGGGATTTGTTTCGACATTTGGATACATTGTGTGCTGAAGGGAGGCTTCCCCAATCTTTGTTTGATTCTGAAGGAGAGATTTGCAGTGAGGATATATTTTGTGCAAAATGCAGGTCCAAAGAATTGACCACTGGTAATGATATAATACTTTGTGATGGTGCTTGTGATCGTGGATTTCACCAGTTCTGTTTGGAACCTCCATTGTTATCTGAGAATATTCCAACCGATGATGAGGGTTGGCTGTGCCCGGGATGTGATTGCAAGGATGACTGTTTTGATCTCCTTAATGACTCCTTCGGAACAAGGCTCTCTATATGTGATTTCTGGGAGAGGGTCTTTCCAGAGGCAGCTGCGGCTGCTGGGAATAAAGTGGATGACAACTTGGGACTTCCATCAGATGATTCCGAGGATGATGATTATAATCCTGATGTTGCAGATGATGAGGAGGTTGAAGGAGGCGAGTCAAGTTCTGATGAGTCTGAGGATGATTCTGCTTCTGAGAAAATGGAGGCTTCATGTAATGAGGACCCATACTTAGGCCTTCCTTCTGATGATTCAGAGGACAACGATTATGATCCTGATACTGTAGATCATGACAAAGATGTGGCTAAAGAAAGTTCAAGCTCTGATTTCACGTCTGATTCTGAGGACGTTGCTGATGTAGTTAAGGGTAATGCATTATCTGGACAGGATAACGATCCTGTACCTGCATCATCTTTGTCAGAGTTAGATCCTGGTGAAGATTCCACTCCTATTTCTGGGAAAAGACATATTGAAAGGTTGGACTACAAAAAGTTGTATGATGAGACCTACCAAAATGCTCCATCTGATACTAGCGATGATGAAGATTGGACGGATAGTCCTGCTTTAAGTAGGAAAAAGAAAGTCACTAGCAAAGGGCCGCCAGTGTCACCAAATGGGAAAACCTCAATACCAGATCATATGCAGAAAGAAACTGAAAATACTCCTAGGAGAAATACTCGTCAAACTAAAGTTGAAAATATGGACAATTCGCCCAGTAAATCACTTGAAGGCTCTAAGAGGGCTGGTTCAAATGATAAAAAGCGAGGATCTTCAACTTACAAAAGATTTGTGGAAGATGCAGTTAAGGAACTTTACAAAAACTTTAAAGACAATCAGTACCCAGATCGTGCCACAAAAGAAGGCCTGGCACAAGAACTTGGGCTTACTTTCAAACAGGTTAGCAAATGGTTCGAGAATGCTCGTTGGAGCTTTCGGAATTCCCCACGTATGGAAGCCAGGGCAAATAAAAGTGCTTCACAGGGTGCCACTTCCAGCAGAGTTGAAAATGAGATGGCACTTGGTGATGAGAAGAGGGACTCAAAATCAGTGTCCCAGGAGGGGAATATACAGAAATCAAAATCCCAAAGCTCTATAAAGAGGAAGCATATTACAGATACTGAGGAATCTGATGCAAATATAAACGTTGATAGCGCAGCAACAAATCCTCTTGTTCCCTCACCCAAAGGTGGTGAAGTGCGGAGAAATCGCAGAATTAAAGCAAGGAAGAGAAAATGA 2883 0.4083 MFKMNCDLGKSCQNGEGSCFRHDTVEQANAISMEAPSDQMNSKNGELMHHDNNTSAQLHTIDLGITHSELPEKPNQIDSESLDNEQKVIGTRETTFLIDEKSPSDGVIGNSAFQLPAQPQCDLDKSCQTEKGSGFQHKTLELGNSIGMDASSENLSSKTRKSLCHIHKTSEQLHTLDPRTAHFKTSEKTTQTGSKFLNNEQRVLGNEETSSLLDEKQLTVSDSMIGDSVIQLATQSQGDLDNSCQNGGGSCFQHNTLKQISGFLSNDESQNKRQQVSKNENNEPVERSGAIEQLDPPSQETPMGSSPNSLQRNSKRETRARLGCKDKRTTTSLKKKYILRSSDRVLRSRVREKPKPSQSNTNLVNVDHVGENRRKGRKKNKGGGRIVTDEYSRIRARLRYFLSRVSYEQNLIDAYSGEGWKGYSLEKLKPEKELQHAKSKILGFKLKIRDLFRHLDTLCAEGRLPQSLFDSEGEICSEDIFCAKCRSKELTTGNDIILCDGACDRGFHQFCLEPPLLSENIPTDDEGWLCPGCDCKDDCFDLLNDSFGTRLSICDFWERVFPEAAAAAGNKVDDNLGLPSDDSEDDDYNPDVADDEEVEGGESSSDESEDDSASEKMEASCNEDPYLGLPSDDSEDNDYDPDTVDHDKDVAKESSSSDFTSDSEDVADVVKGNALSGQDNDPVPASSLSELDPGEDSTPISGKRHIERLDYKKLYDETYQNAPSDTSDDEDWTDSPALSRKKKVTSKGPPVSPNGKTSIPDHMQKETENTPRRNTRQTKVENMDNSPSKSLEGSKRAGSNDKKRGSSTYKRFVEDAVKELYKNFKDNQYPDRATKEGLAQELGLTFKQVSKWFENARWSFRNSPRMEARANKSASQGATSSRVENEMALGDEKRDSKSVSQEGNIQKSKSQSSIKRKHITDTEESDANINVDSAATNPLVPSPKGGEVRRNRRIKARKRK 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0269 960 MobiDBLite consensus disorder prediction 266 327 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 294 313 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 344 384 - -
Lele33g0269 960 CDD PHD_PRHA_like 481 533 IPR045876 -
Lele33g0269 960 Gene3D - 805 876 - -
Lele33g0269 960 SMART HOX_1 805 867 IPR001356 GO:0003677
Lele33g0269 960 ProSiteProfiles 'Homeobox' domain profile. 803 863 IPR001356 GO:0003677
Lele33g0269 960 MobiDBLite consensus disorder prediction 579 613 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 860 960 - -
Lele33g0269 960 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 271 924 - -
Lele33g0269 960 Pfam PHD-finger 481 536 IPR019787 -
Lele33g0269 960 ProSitePatterns Zinc finger PHD-type signature. 482 533 IPR019786 -
Lele33g0269 960 MobiDBLite consensus disorder prediction 866 883 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 780 794 - -
Lele33g0269 960 SMART PHD_3 481 534 IPR001965 -
Lele33g0269 960 SUPERFAMILY FYVE/PHD zinc finger 471 539 IPR011011 -
Lele33g0269 960 FunFam Homeobox protein HAT3.1 462 538 - -
Lele33g0269 960 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 475 538 IPR013083 -
Lele33g0269 960 ProSiteProfiles Zinc finger PHD-type profile. 479 536 IPR019787 -
Lele33g0269 960 SUPERFAMILY Homeodomain-like 804 865 IPR009057 -
Lele33g0269 960 MobiDBLite consensus disorder prediction 795 810 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 266 286 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 571 810 - -
Lele33g0269 960 Pfam Homeodomain 809 858 IPR001356 GO:0003677
Lele33g0269 960 CDD homeodomain 811 863 IPR001356 GO:0003677
Lele33g0269 960 MobiDBLite consensus disorder prediction 761 779 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 697 715 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 641 659 - -
Lele33g0269 960 MobiDBLite consensus disorder prediction 886 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0269 Lele-ChrLele33 1634634 1638731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0269 319 864 Homeobox Transcription Factor Family AT3G19510 45.439 7.59e-135 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Lele33g0269 Homeodomain 6.9e-11 CL0123