Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0257 ATGAATGCAGATTCGGCAACAATGGAGGCGCAGCAGAGAGATGTGGATCGGGTCAAGGGACCATGGAGTCCCGAGGAGGATGAGTTGTTGCGCAAGCTCGTGCAACGGTACGGCCCCCGGAATTGGTCCGCCATAAGCAAATCAATACCCGGCAGGTCCGGGAAGTCTTGCCGTCTGCGGTGGTGCAACCAGCTATCGCCGGACGTGGAGCACCGGCCATTCACACCGGAGGAAGACGAGATCATCATCCAGGCCCACTCAAAGTTGGGCAACAAGTGGGCCACCATAGCGAGGCTTCTGAACGGCCGTACTGACAACGCTATCAAAAACCATTGGAACTCGACCTTGAAGCGCAAGTATTCGTCGTTGATCGCCGATGAAGGTGCCACAATCGATGGCCCTCCGGAAAAGAAACTAGCCATCGTGGAACGCGGTGTGCCGATACAGTCATTGCCGCCGGTGGGCCACTGTTACAGCCCAGGCAGTCCATCAGGATCTGATGTTAGTGATTCAGGTCTTCCCGCCGTGGTTTCATCTTCGATGGCGATTCGTCCTTTAGCAACAAACTGCGCAATCTTGTCTCCTTCCCAGCAGGTCGAGTCGCGCCCGAGTCCAATCTTCAACTTAAACAAAGAGCCTAGCACTGATCTTAGTCTGTCCCCTCTGGGAGCTGAGTTCAAGGAGTCCCAGATGAGTCAGAGTCCATGTTCTAGGACCGAGGCAGCAAAGCAGTCTGAGAAGTTGTCGTCAATGGCGACATTGGGGCCCGATTTACTGATGGTGATGAAGGAAATGATAAGGGAGGAAGTGAGAAATTATATGGAGGGACATAATGGTAGATTGTGCTCTAATCCTGACGCTATGAGGCGGTGGAAATATCAGCCACTAGCCCATAAACGGTTTCTACATGCTTCACGTGACTGCAATACAAGGTTGGGGGCCAGGGGTGGTCATATGAACTCCAACAATTATTTGGGTCCTATCAAGATAAGGAAAAGGACACGATTGATTTTGAGGAAACGTCAAACAATCATGGGGTTTTGTTTTCGGCCGTATAATGTATGTGCTGAAAAGGAGATCGCTGCCATAGCTTTAGGACAATCCTCGATCCTCTTTGAATCGGAAAGACAGCAAGCCAAGATGTTGCCCACGGCCTCTAAAGGACGCCTCTCGTCCTCTTCGTCTCGAGCTAATCCCATGTTGCTTCAGTATCTCCGCCGAATTGTCAAGTGGCAACAAATGGATATTGAGTATACTTTCTGGCAAATGCTTCACCTGTGCACCTCACCAAAAGTTGTCTATCAGCATACTAAATATCACAAACAAACCAAGAATCAATGGGCACGTGACGACCCTGCTTTTGTTGTGATCTGCAGCCTTCTTTTGGCCGTTGCAACTCTAGCATATTGTGCAGCCTATGATCATAGTGCTGCACATGCACTTTTTGTCGTATTCGCAGTATTGGTTTTCCACTTTTTGGTGTCTGGAGTAGCTCTGGCAACATTTTCTTGGTTCCTGACTAATTCTTATCTTCGAGAAGAGGCTCCTAATAGTTATGTAGTTGAGCAGCGTGTTGAATGGCTATACGCATTTGATGTGCACTGCAACTCCTTCTTCCCTATGTTTGTCTTGCTTTATGTGATCCATTATTTTCTTTCTCCTCTATTGGTGGCTCATGGTTTCATTCCAGCATTGCTGTCAAATTTGCTATTCATGGTGGGCGCTTCATACTATCACTATCTCAATTTCTTAGGATATGACGTTCTGCCCTTTTTGGAGAGGACCACTTTTTTTCTGTACCCGATTGGTGTTGTCATCATCCTTTCTCCTATTTTGATTTTGGGTGGCTTCAATCCTTCTAAATATTTCATGAACATGTTCTTCAGTCGACAAATGTGA 1899 0.4787 MNADSATMEAQQRDVDRVKGPWSPEEDELLRKLVQRYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPDVEHRPFTPEEDEIIIQAHSKLGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSLIADEGATIDGPPEKKLAIVERGVPIQSLPPVGHCYSPGSPSGSDVSDSGLPAVVSSSMAIRPLATNCAILSPSQQVESRPSPIFNLNKEPSTDLSLSPLGAEFKESQMSQSPCSRTEAAKQSEKLSSMATLGPDLLMVMKEMIREEVRNYMEGHNGRLCSNPDAMRRWKYQPLAHKRFLHASRDCNTRLGARGGHMNSNNYLGPIKIRKRTRLILRKRQTIMGFCFRPYNVCAEKEIAAIALGQSSILFESERQQAKMLPTASKGRLSSSSSRANPMLLQYLRRIVKWQQMDIEYTFWQMLHLCTSPKVVYQHTKYHKQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHALFVVFAVLVFHFLVSGVALATFSWFLTNSYLREEAPNSYVVEQRVEWLYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPALLSNLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIILSPILILGGFNPSKYFMNMFFSRQM 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0257 632 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lele33g0257 632 MobiDBLite consensus disorder prediction 201 220 - -
Lele33g0257 632 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Lele33g0257 632 ProSiteProfiles Myb-like domain profile. 14 65 IPR001005 -
Lele33g0257 632 PANTHER PROTEIN UNC-50 HOMOLOG 383 629 IPR007881 -
Lele33g0257 632 MobiDBLite consensus disorder prediction 1 22 - -
Lele33g0257 632 SMART sant 70 118 IPR001005 -
Lele33g0257 632 SMART sant 18 67 IPR001005 -
Lele33g0257 632 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
Lele33g0257 632 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Lele33g0257 632 Gene3D - 73 119 - -
Lele33g0257 632 Gene3D - 18 70 - -
Lele33g0257 632 CDD SANT 21 63 IPR001005 -
Lele33g0257 632 Pfam UNC-50 family 404 627 IPR007881 -
Lele33g0257 632 FunFam MYB transcription factor 19 70 - -
Lele33g0257 632 MobiDBLite consensus disorder prediction 201 217 - -
Lele33g0257 632 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele33g0257 632 FunFam Transcription factor MYB44 73 119 - -
Lele33g0257 632 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 120 IPR017930 -
Lele33g0257 632 CDD SANT 73 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0257 Lele-ChrLele33 1558725 1566223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0257 15 274 MYB Transcription Factor Family AT5G67300 48.410 3.73e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele33g0257 UNC-50 4.2e-77 No_clan