Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0234 ATGCCTGAACAGAGAGGAGCTCTAAACCAGCACCAGATGGGGTCATGGGATCTCTCGATTCCTGACGAGAAATTATCAAACATGGATCCACCACCGATCATAGGAAGCTCTTCCAACAATAATGTCCCTCTCACTGCTGACCAGAACGACCAAGTCGACGACGCAGTTAATGCTGAGGGTGATAAGACGGCGCCGTCGAGGGCAATCCGAGGTGGAAGGAAGAGGACAACTGGTAAGACCGACGGAGGAGAAGCGGAAGGTGCGAACGGAGCTGGTGGTGAAGCCGCCGATGATCACGAGATGCACATATGGACAGAGAGGGAGAGGAGGAAGAAGATAAGAAACATGTTCGCTAACCTTCATGCTCTGCTTCCCCAGCTTCCTGCTAAGGCTGACAAATCAACCATTGTTGATGAAGCGGTGACGTACATCAAAAGCCTGGAGATCACTGTGGAGAATCTGGAAAAGAAAAAACAGGAAAGGCTGAAGCAAGCCCAGCAATCTGCTGATTCAAGCACCACCATTGTGTATGATCCTTCTTCTGTGGATATCAACTCTCAGAATCATCCCTATGTGTCAAGGGAGGCATTCATGGCTGATCATGGTGGATCTTCCAATCATAATTCAAGCACTAATAACAACTTGGCCTCCACCACAAACGCCATTGCTATTGGAACTTCACCTTCACTGTTACTTCCCGGAACTGGGAATAACCCAGTAGGGTTTCAGACTTGGAGCTCTTCAAATGTTGTCGTCAACATTTGTGGTGATCAGGCTCAGTTCAATGTGTGCTCCTTCAAGAGGCCAGGCCTCTTCACCAGCATATGCACTTTGTTTGAGAGGTACAAGATCGAGGTTTTGTCTGCTCATGTTTCGTCTGATGATTCTCGATTCTTTTACATGATTCACGCACTGGCCAAGAGAGGTTCAAACGAGGCACTTTCAGAGGAGGACAGTTTCAGGCAAGCAGCTGGAGAAATGTGACAAGACACAGAATGTTCCGAGCGGAAAAAGGTATTTTTCGCAATTATTTTTCAGCAATAG 1044 0.4761 MPEQRGALNQHQMGSWDLSIPDEKLSNMDPPPIIGSSSNNNVPLTADQNDQVDDAVNAEGDKTAPSRAIRGGRKRTTGKTDGGEAEGANGAGGEAADDHEMHIWTERERRKKIRNMFANLHALLPQLPAKADKSTIVDEAVTYIKSLEITVENLEKKKQERLKQAQQSADSSTTIVYDPSSVDINSQNHPYVSREAFMADHGGSSNHNSSTNNNLASTTNAIAIGTSPSLLLPGTGNNPVGFQTWSSSNVVVNICGDQAQFNVCSFKRPGLFTSICTLFERYKIEVLSAHVSSDDSRFFYMIHALAKRGSNEALSEEDSFRQAAGEMXQDTECSERKKVFFAIIFQQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0234 347 Pfam Helix-loop-helix DNA-binding domain 102 148 IPR011598 GO:0046983
Lele33g0234 347 SMART finulus 105 153 IPR011598 GO:0046983
Lele33g0234 347 CDD bHLH_AtbHLH_like 102 155 IPR045239 -
Lele33g0234 347 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 27 327 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele33g0234 347 Gene3D - 93 165 IPR036638 GO:0046983
Lele33g0234 347 Coils Coil 137 164 - -
Lele33g0234 347 MobiDBLite consensus disorder prediction 31 52 - -
Lele33g0234 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 97 147 IPR011598 GO:0046983
Lele33g0234 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 100 166 IPR036638 GO:0046983
Lele33g0234 347 MobiDBLite consensus disorder prediction 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0234 Lele-ChrLele33 1443342 1448406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0234 69 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 40.569 2.32e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele33g0234 HLH 2.1e-10 No_clan