Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0230 ATGGGTACCCTTGACAAACCAACAACAATGGTTTCTTCAGACTCCTCAGAACAGAAGGGGAAAAATATGGCGGAATCAAATGTCAACATGATTCACTGTCCTTTGATCCAGCAGTCTCATAGCTCCTTGGATGGCCCAGTGGCTATTCTGTGGGATATTGAGAATTGTCCAGTTCCAAGTGATGTGCGCCCTGAGGATGTAGCTAATAATATACGAATGGCTTTGAGGGTGCACCCGGTGATTAAAGGAGCTGTTATGATGTTTTCTGCTTATGGCGATTTCAATGCCTTCCCCAGGCGACTCAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTTATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGATAAGGCTATCTTGGTGGACATGTTCTTATTTGCCCTTGACAACCCTCCCCCTTCCTCCATCATGCTGATATCTGGGGATGTTGATTTTGCTCCAGCACTTCACATTCTCGGCCAACGTGGTTATACAGTTATTCTTGTCATCCCAGCTGGCGTGGGTGTTTCATCTGCCCTAAGTAATGCTGGAAAATTCGTTTGGGACTGGCCTAGTGTGGCTCATGGCGAAGGCTTTGTGCCTCCCTCAAAGGCTTTAGTTCCAACTCGTGTGAATCCAGCTGAGGTTGCTGGATATCTGATGGGGATCCATATCAATGACAATACTCATGGACAAAATGAAGAAGAAGCAATAGTTTACAGAGGAATGTCACAGAGCTATTATAAATCTAGGGATTTCTCAGTTGTGTCACAATCTTTGTCTGAATACAATGGTAGCACATTAAACGGGGCCTCTCTTCCCACAACTTTAAGGTCACACAGCCTTCCTAATGAATTTAGGGATGCTTCAGGAGCACCTATGTCTTCCACTGACCAAAATGAATGCCCATTGTGGGTACAACCTGGGGATTTAAATGGTCTCAAGGGCCAGTTAGTAAAGTTGCTTGAACTTTCAGGGGGATGCCTGCCTCTGACTCGTGTTCCAGCTGAGTACCATAAATTTTTTGGGAGGCCCCTTTATGTAGCAGAATATGGAGCATTCAAGTTAGTAAATCTTTTCAAGAAGATGGGTGACACCATGGCTGTAGAAGGGAAGAGGAATCGGAAGTTTGTGTATCTTCGGAATTGGAAAGCAAGCCCAAGTGCGCCTCCTTTGTCTCTGGCACAGAAAGATAAGAAAGGAAGGGGGGCTCAGGAAGAGAATGTGGATGTTGTCACCGGTGGATGCTCTTCAGATGAGTTCTCAGATGAAGACAGAATAGTCATTGAAGAGCATTATGAGAGAAGTGGAATAGGAAAGAGCCATCAGGGAAGAGCATCCAGATGTGAAATTGATGACAATCTTGAGCAGTTCAAGTATGAGCTACAGGAGATTCTAGTCAGCTATTCTTGCCGAATATTTCTAGGTTGCTTTGAAGCAATATACCAGCAACGGTATAAGAAACCACTGGAATGTCAGAGATTTGGTGTGGACAAGTTGGAGGATTTGCTGGAGAAAGTGAGTGACCTGGTGGAATTACACGAAGAACCAGTAAGCAACAGGAAGTTCCTGGCTGCTGTGGGTGGGTAG 1593 0.4526 MGTLDKPTTMVSSDSSEQKGKNMAESNVNMIHCPLIQQSHSSLDGPVAILWDIENCPVPSDVRPEDVANNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPAGVGVSSALSNAGKFVWDWPSVAHGEGFVPPSKALVPTRVNPAEVAGYLMGIHINDNTHGQNEEEAIVYRGMSQSYYKSRDFSVVSQSLSEYNGSTLNGASLPTTLRSHSLPNEFRDASGAPMSSTDQNECPLWVQPGDLNGLKGQLVKLLELSGGCLPLTRVPAEYHKFFGRPLYVAEYGAFKLVNLFKKMGDTMAVEGKRNRKFVYLRNWKASPSAPPLSLAQKDKKGRGAQEENVDVVTGGCSSDEFSDEDRIVIEEHYERSGIGKSHQGRASRCEIDDNLEQFKYELQEILVSYSCRIFLGCFEAIYQQRYKKPLECQRFGVDKLEDLLEKVSDLVELHEEPVSNRKFLAAVGG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0230 530 CDD LOTUS 312 381 - -
Lele33g0230 530 Pfam OST-HTH/LOTUS domain 456 518 IPR025605 -
Lele33g0230 530 Pfam OST-HTH/LOTUS domain 313 378 IPR025605 -
Lele33g0230 530 ProSiteProfiles OST-type HTH domain profile. 311 383 IPR025605 -
Lele33g0230 530 MobiDBLite consensus disorder prediction 1 23 - -
Lele33g0230 530 CDD LOTUS 456 518 - -
Lele33g0230 530 Pfam NYN domain 46 185 IPR021139 GO:0004540
Lele33g0230 530 Gene3D - 39 192 - -
Lele33g0230 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Lele33g0230 530 Gene3D - 311 380 IPR041966 -
Lele33g0230 530 Gene3D - 451 523 IPR041966 -
Lele33g0230 530 CDD PIN_limkain_b1_N_like 46 172 - -
Lele33g0230 530 PANTHER LIMKAIN B LKAP 37 489 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0230 Lele-ChrLele33 1422816 1424408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0230 43 197 C2H2 Transcription Factor Family AT5G61190 41.935 5.86e-28 117