Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0217 ATGTCCTCCAACACATCATCCAGCCTCCTCCCCCCTCCCTCCTCCTCTCTTTGGCCCCCCTCCGCCCTCACTCCCGACCAAGAACACTCTGTCATCGTCGCCGCACTCACCAACGTCGTCATTGGCTCCACCGCCGATCTCACCCACCAGTTCAACTTACCCCTTTCCTCTGCCGCCGCCGGGAATACCGTCCACAATGCCAACCGCGTGGCCCCAGCCCTGAATGTTGGAGTCAGCCGTTCCGATTTCGGATTCTCCTCCTGCTCCGACCGCAAGATTTTACCAGAAGAGAAGCCCAAGAACGGCGGGAACAAACAGCCGCAGAAGAGGGCGAAGAAGAAGTACAGGGGGGTGAGGCAAAGGCCCTGGGGGAAATGGGCCGCAGAGATTCGAGACCCGAGACGGGCTACCAGGGTCTGGCTGGGAACCTTCAAGACGGCCGAGGAAGCAGCTCAAGCTTACGATAAGGCGGCCATCGAGTTCCGTGGGCCCCGCGCCAAGCTGAATTTTCCTTTCTCTGATGACTCGTTGCTGAATTTGCAGGCCAGTCAACCACCGGAAGCTCCTTCAACGGCGGGGCCTCTGGGGACAGCAGCGTCAGAGGCGGGGCACGGGAATACCGAGAATCCGAACAGCGGAATGGCCACGATGGTGTCTGAGGACGGTGAATTCTGGGATAGGATTGGGAAAGCAGATTTGGAACAGTGGTGGATGGATTTTGCGGCCGGAGACTCTTCGGACTCTGGTCCCGGAACTACTCAGAGTTGGTGA 771 0.5914 MSSNTSSSLLPPPSSSLWPPSALTPDQEHSVIVAALTNVVIGSTADLTHQFNLPLSSAAAGNTVHNANRVAPALNVGVSRSDFGFSSCSDRKILPEEKPKNGGNKQPQKRAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFKTAEEAAQAYDKAAIEFRGPRAKLNFPFSDDSLLNLQASQPPEAPSTAGPLGTAASEAGHGNTENPNSGMATMVSEDGEFWDRIGKADLEQWWMDFAAGDSSDSGPGTTQSW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0217 256 SUPERFAMILY DNA-binding domain 114 173 IPR016177 GO:0003677
Lele33g0217 256 CDD AP2 113 171 IPR001471 GO:0003700|GO:0006355
Lele33g0217 256 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Lele33g0217 256 MobiDBLite consensus disorder prediction 178 220 - -
Lele33g0217 256 PANTHER DNA-BINDING DOMAIN 97 200 IPR044808 GO:0003700|GO:0009873
Lele33g0217 256 MobiDBLite consensus disorder prediction 1 24 - -
Lele33g0217 256 MobiDBLite consensus disorder prediction 90 118 - -
Lele33g0217 256 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Lele33g0217 256 FunFam Ethylene-responsive transcription factor 2 113 172 - -
Lele33g0217 256 Gene3D AP2/ERF domain 113 172 IPR036955 GO:0003700|GO:0006355
Lele33g0217 256 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Lele33g0217 256 MobiDBLite consensus disorder prediction 202 216 - -
Lele33g0217 256 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Lele33g0217 256 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0217 Lele-ChrLele33 1363075 1363845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0217 112 171 AP2-EREBP Transcription Factor Family AT2G33710 81.667 6.47e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele33g0217 AP2 4.7e-15 CL0081