Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0212 ATGAAGCCGACAACTTCAGCCACTCCTTCAAAGGTTGCACATAAGAACTCAGAAAGATCTGTGAGATCAAAGAGATCAACCACCGAATCTCAGCCTCCTGCTCTTCAACGTGCTCTTCAACGAGCAACAGATATCCAAGCAAAATTATCCAACGAGCATCCCAGCTTTATAAAGACAATGTTGCATTCTCACGGTATTCCTAAACCTTTCTGTGATCTGCATATGCCAAAGGAAGATACAATGTTTCTTTTGGAAGATGAGGATGGAGAAGAATTCCGAACCAAATATCTTGGTCGAAAGATGGGCTTAAGTGATGTTGCTCAACAAAATGATCCAAGCAGCAGCAGAATGATCTGTGACAGTACAGCACCATCAGCAGATCAACCTGAAAACACCAGTAATGACCCAGAAGAAAATTCTGGCCTTCAAGTTCTGAACGGGAGATCTATGACCACTTGCCAACAAGTCACAAGTGTTGATACTTTTAGCATTGTGGTTGATGGCTTGGTTCTTGACTCTCTGCTACCCCAACATCTCAGGATGAAGTACTATGATTTGTGCTGTAGCCAACAAAGTTTTCTGCATGAGCATATTTTGGCAGGTCAAAACCGTGAACTGGTTCTTGGAATGATCCGTGAGACAATTAATATTGCTGATGCCATTCGAGGCAGCAAGATTACGACGCCTTCACGTAGTTTTGACTTGTGGTTTAGAAAGTTGAAGGCTCTTGAAATATGGGGCATGAACGTCAATTTCTTGCTCGTTAGGCTACAACAACTCAGGGGTTTAGCTTCAAAAACTGAGGAGTATAGAGAGGCGAGAAGAGCTCGAGAACAAGCCCTAGAGCAAAAGAAAGGCCTTCAGCTAAGGCTTAAGGAAGTGAAAGAGACCATAAGGAGACTTGAGGGTCAGTTTCAGAAACACACACACAGACGGATATCACATAGCCGTCCCAGTTCCTACCTTGAGAAATTTGTGAAGGATGGAAACCTCGAAATAAGAGCGAAGTTGGTTCATGAAGTGGTAACCCAACTTTGTAGGAAACCAAAGAGGGAAAGTAAACAATGCCCCCTGCAGGATCGACTAGAGACTTTTAGCCTACAAGACTGA 1110 0.4342 MKPTTSATPSKVAHKNSERSVRSKRSTTESQPPALQRALQRATDIQAKLSNEHPSFIKTMLHSHGIPKPFCDLHMPKEDTMFLLEDEDGEEFRTKYLGRKMGLSDVAQQNDPSSSRMICDSTAPSADQPENTSNDPEENSGLQVLNGRSMTTCQQVTSVDTFSIVVDGLVLDSLLPQHLRMKYYDLCCSQQSFLHEHILAGQNRELVLGMIRETINIADAIRGSKITTPSRSFDLWFRKLKALEIWGMNVNFLLVRLQQLRGLASKTEEYREARRAREQALEQKKGLQLRLKEVKETIRRLEGQFQKHTHRRISHSRPSSYLEKFVKDGNLEIRAKLVHEVVTQLCRKPKRESKQCPLQDRLETFSLQD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0212 369 MobiDBLite consensus disorder prediction 103 143 - -
Lele33g0212 369 Coils Coil 263 311 - -
Lele33g0212 369 SUPERFAMILY DNA-binding pseudobarrel domain 50 99 IPR015300 -
Lele33g0212 369 CDD B3_DNA 54 100 IPR003340 GO:0003677
Lele33g0212 369 Gene3D - 34 108 IPR015300 -
Lele33g0212 369 MobiDBLite consensus disorder prediction 1 36 - -
Lele33g0212 369 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 11 104 IPR044837 -
Lele33g0212 369 MobiDBLite consensus disorder prediction 106 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0212 Lele-ChrLele33 1330547 1333676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0212 38 104 B3 DNA Binding Superfamily AT3G19184 47.297 8.41e-14 69.3