Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0196 ATGATGAGAAGGCTCTGTTCGGATCGCCACTACGACTTCGAGAGCTGGGTCGAGGCCAAATGCTCCTCCTGCGTGGATCCGTCGGAGATAGAAGAAGAAGAAAACCCAAGGCAGAGTTCGCCATCAACTGTGTCTAATCTAATCTATGGCCCACTAAGTGACAAGTCATCTATTGGGCCAAAATGGCTACTTCCTGGCCCATTACGTATTTTGGGCCAACAGCGGGCCACTTCAGGGCCCACTGATTGGCAAGTCGTCTATTGGGCCAAAATGGCCCTTCCAGGCCCATTAAGCCCTTTGGTCCAACAGTGGGCCAAGTCAGGGTCCATTAAGTTGCAAGCCTTCTTTTGGGCCAACGTAGCTCCACTTTCTGGCCCATTAAGTGAATGCTCGAGAACTCTAACCTCCCCTTGTAGTGCACACGGAGTCTCAAGCAATTCGACAGCCATGCCGAAAGGGACAGACCGCCTGGTGAACAGCGTGAAACAGTTCGTCGGGGTTCGGTACAAGGTTTTTTCGGCTCGTTATGGGCACCAGTTCAGTCCAATTAAGCTCGTTTTGTCTCCTTTCACTCTGGCTTTCGACATTGCCGGTTCTGCTCCTCGTGGCTTTGGTGTTCCCGAGCTTATCTCTATGCTTTCATGCAACGGAATGCCTTTTTATTGCCATAATATTGGAAAAGGGATTCCTTTAACTTCTACTACCAATGCTTCTTCTTCTCTCTTCTCGGAGTTCACTTTTTTGGTTAGTAAAGGGAATGGGAGTGGTCCGTTCGGTGGAGCATGTTACAACCCCACTGTTGATGTTAAAATTGTGGACTGTGGAGAAATTCCTCAAGAAACAGATGATGGAATATGTAACTTTTTCAAAGACGGCGATGCTTATCCTGATTGGCCGGCAGACCTTGATGAAAGCCCTAATGATCTCCATTGGTGGATGAATGCTGTTGATTCCATTAAAACTTTTGGTAACGTGTACTTCAAGAAACAAGATTATAAAATGGCTTTAAAGAAGTATCGGAAGGCTCTACGCTACGCTGATCTTTGCTGGGAGAAAGAAGGGGTTGATGCAGACAAGAGTTCAAGTTTGAGAAAAACCAAGTCTCAGATTTTTTCAAACTGCTCTGCTTGTAAATTGAAGTTAGGGGATCTCAAAGGAGCATTATTAGATACAGAATTTGCAATGCGCGAAGCAGACGATGTCAAAGCTTCGTTTCGCCAAGGGCAGGCATACATGGTGCTCAATGACATTGATGCTACAGTATAA 1266 0.4637 MMRRLCSDRHYDFESWVEAKCSSCVDPSEIEEEENPRQSSPSTVSNLIYGPLSDKSSIGPKWLLPGPLRILGQQRATSGPTDWQVVYWAKMALPGPLSPLVQQWAKSGSIKLQAFFWANVAPLSGPLSECSRTLTSPCSAHGVSSNSTAMPKGTDRLVNSVKQFVGVRYKVFSARYGHQFSPIKLVLSPFTLAFDIAGSAPRGFGVPELISMLSCNGMPFYCHNIGKGIPLTSTTNASSSLFSEFTFLVSKGNGSGPFGGACYNPTVDVKIVDCGEIPQETDDGICNFFKDGDAYPDWPADLDESPNDLHWWMNAVDSIKTFGNVYFKKQDYKMALKKYRKALRYADLCWEKEGVDADKSSSLRKTKSQIFSNCSACKLKLGDLKGALLDTEFAMREADDVKASFRQGQAYMVLNDIDATV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0196 421 ProSiteProfiles TPR repeat profile. 316 349 IPR019734 GO:0005515
Lele33g0196 421 PANTHER EMBRYO DEFECTIVE 2737 150 216 - -
Lele33g0196 421 Gene3D Tetratricopeptide repeat domain 312 421 IPR011990 GO:0005515
Lele33g0196 421 SUPERFAMILY TPR-like 314 418 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0196 Lele-ChrLele33 1235811 1240762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0196 311 418 Calmodulin-binding Proteins AT3G25230 35.294 4.06e-08 53.5