Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele33g0194 ATGGGCTCGCTTCCTCCACCACAACTAAGCTTGGATTTGACACCCACTTTTGTTCCCAAGACAATCACTGATTTCCTCTACGAAGTTTCCACGATCGACAATGCGCCCGTTAAGCTCTCCCGGGTCGATGATTTGGTCAGGAGATTGGAAGAGGAAATGAGGAAGATTGACGCCTTTAGGCGTGAGCTTCCTCTGTGTATGCTCCTCTTGAATGATGCAATCTTAGTTCTGAAGGAGGAATCGGCAAAATTCAGGATACCTGATTCTCAGCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAGAAGGAGGAAAATGAAGCAGAGAAGGAATGCCGAGATAAGAAGAATTGGATGAGTTCTGTACAACTCTGGAACACTGATAGTTATCCCTCCTGTGAGGAAAAAGAACATTATAAATTAGAGAACAAGAAAAATGAAGAACACTCTGTGGCAGAGGATCCTTTCAAATCTTATAGAAATAGAATTGGAAGGAGGGTTTTTATGCCTTTTACAACATACAGTCCAGTTCATATGACAAGTGTGGGAACCAAGGAAGAAAAGGAAGAGTCTGATATTAATGGACTTTCTCTTGTGACTCCTGGAGTTAAAAATCTGAGGGAGGGGTCTATTTCTAGCGGATCAGGAATATCATCTGGCAGGGCGGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGCACTGGACCGCAGCAGACTGCTCGGAAACAAAGAAGGTGTTGGTCACCAGAGCTGCATCGTAGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAATGATGAAGTCAAGAGCCATTTACAAAAATACCGACTTCATACCCGAAGACTTCCAGCTTCTACAACTACACCCGGTAACCAGTCTGTTGTAGTACTTGGGGGTTTATGGATGACCCAAGATCAGTATAATGACTCCTCCAAGGGTAGCGTTTCAGGTTCTGGCTCTCCTCAAGGTCCCCTCCAGTTAGCCTCAGGATCCGGAGGAGGAATGTCCCAAACTGAAGATGACATCATGGAAGATGATGATGATGATGATGAAAAATCCAGAGACCGATAG 1143 0.4479 MGSLPPPQLSLDLTPTFVPKTITDFLYEVSTIDNAPVKLSRVDDLVRRLEEEMRKIDAFRRELPLCMLLLNDAILVLKEESAKFRIPDSQPVLEEFIPLRKECDQKEENEAEKECRDKKNWMSSVQLWNTDSYPSCEEKEHYKLENKKNEEHSVAEDPFKSYRNRIGRRVFMPFTTYSPVHMTSVGTKEEKEESDINGLSLVTPGVKNLREGSISSGSGISSGRAVSSPPCSDQPSLRTGPQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTTTPGNQSVVVLGGLWMTQDQYNDSSKGSVSGSGSPQGPLQLASGSGGGMSQTEDDIMEDDDDDDEKSRDR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele33g0194 380 MobiDBLite consensus disorder prediction 363 380 - -
Lele33g0194 380 MobiDBLite consensus disorder prediction 331 380 - -
Lele33g0194 380 SUPERFAMILY Homeodomain-like 244 305 IPR009057 -
Lele33g0194 380 MobiDBLite consensus disorder prediction 331 360 - -
Lele33g0194 380 Gene3D - 246 304 - -
Lele33g0194 380 Coils Coil 42 62 - -
Lele33g0194 380 MobiDBLite consensus disorder prediction 209 250 - -
Lele33g0194 380 FunFam Myb family transcription factor 246 304 - -
Lele33g0194 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Lele33g0194 380 MobiDBLite consensus disorder prediction 209 249 - -
Lele33g0194 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 375 IPR044787 GO:0003700|GO:0006355
Lele33g0194 380 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Lele33g0194 380 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele33g0194 Lele-ChrLele33 1226964 1229131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele33g0194 41 326 G2-like Transcription Factor Family AT2G03500 42.230 1.33e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele33g0194 Myb_DNA-binding 6.1e-07 CL0123